| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1217 |
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| Symbol | |
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| ID | 5108718 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1376876 |
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| End bp | 1378216 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640502442 |
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| Product | d-galactonate transporter |
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| Protein accession | YP_001186714 |
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| Protein GI | 146306249 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | [TIGR00893] d-galactonate transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.26743 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.06903 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGATG CCAAACCGGG TCGGGTGCGC TACAGCATCT TGCTGATGCT GTTTCTGGTC
ACCACCATCA CCTTTGCTGA TCGCTCCAGC CTCTCCGTCG CCGGTTCGGC GATGCAGGCC
GGCCTGGGCA TCGACGCGGT GACGCTCGGC TACATCTTCT CGGCGTTCGG CTGGGCCTAC
GTGATCGGGC AGATTCCCGG CGGTTGGCTG TTCGACCGCT TCGGCACCAA GCCGGTGTAC
ACCCTGGCGC TGTTCGTCTG GTCTGCGCTG ACCCTGCTGC AGGGCTTCGT CGGCTGGCTG
CCGGGCACCT GGGCGGTGAC CTCGATGTTC CTGCTGCGGC TGCTGGTGGG CTTTGCCAGT
GCGCCGTGCT TTCCCGGCAA CGCGCGGATC ATCGCCTCCT GGTTTCCCAC GGCCGAGCGC
GCCACCGCCA CGGCCATCTC CAGCTCGGCG CAGTACGCTG CCACGGCGCT GTTCGCGCCG
TTGATGGGCT GGGTGGTGCA GACGATGGGG TGGCAGTCGG TATTTATCGT GCTCGGTTGC
CTGGGGCTTG CGCTGTCGCT TGTGTGGCTC AAGCAACTGC ATGGGCCGCG TGCGCATCCA
CGGATCGCGG CGGCCGAGCT GCACTATCTC GCTCAGGGCG GTGCGCTGAT CGATCTGGAA
GGGCAGCGCG GTAGCGCCGG TGGCTCGCAG TGGCGACACC TCGGCCTGCT GCTCAGGCAG
CGCACCATGC TCGGCATCTA CCTCGGTCAG TACTGCAACA ACGCCATTAC CTACTTCTTT
CTCACCTGGT TCCCCGTGTA CCTGGTGCAG GGGCGTGGCA TGAGCATCCT CGGCGCCGGT
TTCGCCGCCG CGCTGCCGGC CATCAGTGGC TGCATCGGAG GTGTGCTGGG CGGCTTGCTG
TCCGACGGCA TGCTGCGCCG CGGCCATTCG CTGACCCTGG CGCGCAAGCT GCCGATGGTG
CTCGGCCTGC TGCTGTCGAG TGCCGTGGTG CTGTGCATTT ATGTCGACAG CGACGCCGCG
GTGGTGGCGC TGATGGCCCT GGCGTTCTTC GGCAAGGGTC TCGGCTCGCT GGGCTGGACG
CTGGTGGCCG ACACCTCGCC GCGGCAGATC CTCGGCCTGT CCGGCGGGCT GTTCAATACC
TTCGGCAATC TGGCGGCGAT CACCACGCCC ATCGTCATCG GCTACCTGGT CAGCCATAGC
GGTTCTTTCG ATGGAGCATT GGCCTACGTC GGCCTCAATG CTCTGCTGGC GGTCGTCAGC
TTCGGTCTGA TCGTCGGCCG TATTCACAGG GTCGAGCTGG ACGATGACGC CTCGCGCGCC
AATGCCGGCT CGGTATCCTG A
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| Protein sequence | MPDAKPGRVR YSILLMLFLV TTITFADRSS LSVAGSAMQA GLGIDAVTLG YIFSAFGWAY
VIGQIPGGWL FDRFGTKPVY TLALFVWSAL TLLQGFVGWL PGTWAVTSMF LLRLLVGFAS
APCFPGNARI IASWFPTAER ATATAISSSA QYAATALFAP LMGWVVQTMG WQSVFIVLGC
LGLALSLVWL KQLHGPRAHP RIAAAELHYL AQGGALIDLE GQRGSAGGSQ WRHLGLLLRQ
RTMLGIYLGQ YCNNAITYFF LTWFPVYLVQ GRGMSILGAG FAAALPAISG CIGGVLGGLL
SDGMLRRGHS LTLARKLPMV LGLLLSSAVV LCIYVDSDAA VVALMALAFF GKGLGSLGWT
LVADTSPRQI LGLSGGLFNT FGNLAAITTP IVIGYLVSHS GSFDGALAYV GLNALLAVVS
FGLIVGRIHR VELDDDASRA NAGSVS
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