Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1200 |
Symbol | |
ID | 5108701 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 1355691 |
End bp | 1358180 |
Gene Length | 2490 bp |
Protein Length | 829 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640502425 |
Product | ATP-dependent protease-like protein |
Protein accession | YP_001186697 |
Protein GI | 146306232 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1067] Predicted ATP-dependent protease |
TIGRFAM ID | [TIGR00764] lon-related putative ATP-dependent protease |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000280038 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGACT CCGTTGCTGC CAGTCTGCGG CTAGCCCCCG ACTCCCTGAC CCGCCCCTTC GCCCCCGAAC AGTTCAACTT CAGCAGTACC GATGATCTGG AACCCTTCCG CGGCGTGCTC GGCCAGGCCC GTGCGGTGGA GGCCCTGCAG TTCGGCGTGG CCATGCCGCG CGCCGGCTAC AACGTGTTCG TCATGGGTGA GCCGGGTACC GGGCGTTTCT CCTTCGTGCA GCGCTACCTC AAGGCCGAGG CCAAGCGCAT GGAGACTCCG GCAGACCGCG TCTACGTCAA CAATTTCGAC GAGCCGCGCG AGCCGCGTGC GCTGGAATTG CCGGCCGGCA CTGCGAGCGC CTTCATCGCC GACATCAACC AGCTGATCGA CAACCTGCTG GCCACCTTCC CGGCAGTGTT CGAAACACCC ACCTACCAGC AGAAGAAGAG CGCCATCGAC CGCTCCTTCA ACAAGCGCTA CGACCAGGCG CTGGACGTGA TCGAGAAGCT CTCGCTGGAG AAGGGCGTGG CCCTGTACCG CGACAGCACC AATATCGCCT TCACCCCGAT GGCAGACGGC AAGGCGCTGG ACGAGGCCGA GTTCGCCCAG CTGCCAGAGG CCGATCGCGA GCGTTTCCAT GCCGATATCG CCCTGCTCGA GGAGCGCCTG AACGAGGAGC TGGCCAGCCT GCCGCAGTGG AAGCGCGAGT CGAGCAACCT GCTGCGTCAG CTCAACGAAG AGACCATCAC CGTCGCCCTG CAGCCGCTGC TGGCGCCGCT GTCGGAGAAG TACGCCGAGA ACGCCGGCGT CTGCGCCTAC CTGCAGGCCA TGCAGATCAA CCTGCTGAAG ACCGCGGTGG AGCAGCTAGT GGATGTGGAC AAGGCCGACC CGCAGCTGCG CAAGCTGCTG GAGGAAATGT ACTGCCCGAG CCTGGTGGTC GGTCATCACG CCCAGGGCGG CGCCCCGGTG GTGTTCGAGT CGCACCCGAC CTACGACAAC CTGTTCGGCC GCATCGAATA CAGCTCCGAT CAGGGCGCCC TGTACACCAG CTATCGCCAG CTGCGCCCGG GGGCGCTGCA CCGTGCCAAC GGCGGCTACC TGGTGGTCGA GGCGGAGAAG CTGCTCGGTG AGCCCTTCGT CTGGGAGGCG CTCAAGCGCG CCCTGCATTC GCGCCAGCTG AAAATGGAAT CGCCGCTGGG CGATCTGGGG CGCATCGCCA CCGTGACCCT CAATCCGCAG ATGATTCCCT TGCAGCTCAA GGTGGTGATC ATCGGCTCGC GCCAGCTCTA CTACGCGCTG CAGGATCACG ATCCGGACTT CCAGGAGATG TTCCGTGTGC TGGTCGACTT CGACGAGGAC ATTCCCCTTG CCGAAGACAG CCTGGAGCAG TTCGCCCAAC TGATGAAGAC GCGCACCTCG GAAGAGGGCA TGGCGCCGCT GACCGGCGCC GCCGTGGCGC GTCTGGCCAC CTACAGCGCG CGCCTGGCCG AGCACCAGGG GCGTCTGTCG GCGCGCATCG GCGACCTCTT CCAGCTGGTC AGCGAGGCCG ATTTCATCCG CCATCTGGCC GGTGAAAGCA TCACCGACGT CGGTCATATC GAGCGTGCGC TGAAGGCCAA GGCCACCCGC ACCGGGCGCG TTTCGGCGCG CATCATCGAC GACATGCTGG CCGGCATCAT CCTTATCGAC ACCAGCGGCG CTGCCGTCGG CAAGTGCAAT GGCCTGACCG TGCTGGAAGT GGGCGACTCG GCCTTCGGCG TGCCGGCGCG GATTTCCGCC ACCGTCTACC CGGGCGGCAG CGGCATCGTC GACATCGAGC GCGAAGTCAG CCTGGGGCAG CCGATCCACT CCAAGGGCGT GATGATCCTC ACCGGTTTCC TCGGCAGCCG CTACGCCCAG GAGTTCCCCC TAGAGATCTC CGCCAGCATC GCCCTGGAGC AGTCCTACGG CTACGTCGAT GGCGACAGCG CCTCGCTGGG CGAGGTGTGC ACGCTGATTT CGGCGCTGTC GCGCACGCCG CTCAAACAGT GCTTCGCCAT CACCGGTTCG ATCAACCAGT TCGGCGAAGT GCAGGCGGTC GGCGGGGTCA ACGAGAAGAT CGAAGGCTTC TTCCGGCTGT GCGAGGCGCG CGGTCTGACC GGCGAGCAGG GGGTGATCAT TCCGCATTCC AACGTCAGCA ACCTGATGCT CGACGAGCGG GTGCTCGACG CCGTGCGCGC CGGCCAGTTC AACGTCTACG CCGTGCGCCA TGTCGACGAG GCGCTAAGCC TGCTGGTGGG CGAACCGGCG GGGCATCCCG ACGAGAAGGG CCGCTTCCCC AAGGGCAGCG TCAATGCGCG TGTGCTGGAG CGGCTGCGCG AGATCGCCGA GATCGGTATG GAGGAGGAGG GCAAGCACCT CGAACCGGCC AAGGAAAAGA GCGCAGCCGT TGAGGAGGCA GCCAAACCGG CCAAGGCACC TCGGCGCAAG AAGGGCGAAG GCGAGGGTGC CGCGGGCTGA
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Protein sequence | MPDSVAASLR LAPDSLTRPF APEQFNFSST DDLEPFRGVL GQARAVEALQ FGVAMPRAGY NVFVMGEPGT GRFSFVQRYL KAEAKRMETP ADRVYVNNFD EPREPRALEL PAGTASAFIA DINQLIDNLL ATFPAVFETP TYQQKKSAID RSFNKRYDQA LDVIEKLSLE KGVALYRDST NIAFTPMADG KALDEAEFAQ LPEADRERFH ADIALLEERL NEELASLPQW KRESSNLLRQ LNEETITVAL QPLLAPLSEK YAENAGVCAY LQAMQINLLK TAVEQLVDVD KADPQLRKLL EEMYCPSLVV GHHAQGGAPV VFESHPTYDN LFGRIEYSSD QGALYTSYRQ LRPGALHRAN GGYLVVEAEK LLGEPFVWEA LKRALHSRQL KMESPLGDLG RIATVTLNPQ MIPLQLKVVI IGSRQLYYAL QDHDPDFQEM FRVLVDFDED IPLAEDSLEQ FAQLMKTRTS EEGMAPLTGA AVARLATYSA RLAEHQGRLS ARIGDLFQLV SEADFIRHLA GESITDVGHI ERALKAKATR TGRVSARIID DMLAGIILID TSGAAVGKCN GLTVLEVGDS AFGVPARISA TVYPGGSGIV DIEREVSLGQ PIHSKGVMIL TGFLGSRYAQ EFPLEISASI ALEQSYGYVD GDSASLGEVC TLISALSRTP LKQCFAITGS INQFGEVQAV GGVNEKIEGF FRLCEARGLT GEQGVIIPHS NVSNLMLDER VLDAVRAGQF NVYAVRHVDE ALSLLVGEPA GHPDEKGRFP KGSVNARVLE RLREIAEIGM EEEGKHLEPA KEKSAAVEEA AKPAKAPRRK KGEGEGAAG
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