| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1157 |
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| Symbol | |
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| ID | 5108130 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1303840 |
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| End bp | 1304802 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640502381 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001186656 |
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| Protein GI | 146306191 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0192755 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.578291 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAACA GAAATGATTT GCGTCGGGCG GACATCAATC TGCTGGTAGT TTTCGAAACC
ATGATGCACG AGCAAAATGT TAGCCGTGTC GGCGAGAAAC TGTTCCTTGG GCAACCAGCA
GTCAGCGCTG CCTTGGGGCG CCTACGCCAC CTGTTCGATG ACCCGTTGTT CATTCGCACC
GGGCGGGTAA TGGAGCCTAC ATCCCGCGCC CAGGAAATTT TCTCCAACCT GACGCCTGCT
CTCGACAGTA TTGCTGCTGC GTTGGGCAAG TGTCAGACGT TCGACCCGAC AACGAGTGAA
GCCACTTTTC ATATTGGTCT TTCCGATGAC GTCGAATACG CCTTGTTACC CACTCTACTG
CGCCACCTAC GCGTCGATGC ACCGAACATA AGGCTTGTGG TACGTCGCGC CGATCAATGG
CAATTGCCCC AGTTGCTTGC ATCCGGGGAG ATTTCGCTTG GCATCAGCCA TGCCTTGCAG
CTGCCGGCCA ATGCGCGGAG TAAGCATTTA CGGTCGATTC GCCCGATGTT GCTGCGGGCT
GACTCACAGG CTGGCGCACT GACCCTGGAA GAGTTCTGTC GGCGGCCCCA TGCCGTGGTG
TCGTCCATGG GCAACGTTAT CGAGAATGCC GACCGGGCCC TCCATTCGCT TGGGCGTCAA
CGTAAAGTCG TCCTCGCTGT GCCGCAGTTC AGCGCCTTAC CCATGCTACT TGAAGGCAGC
AGCATGATTG CCATCGTGCC GGAATATGTT GCTCAGGCCA TGTCTGGATC GGGGGGCTTG
AGAGCTGAAG CCGTGCCAGT GGTACTTCCT CAGCAAGAGC TATCGATGGT CTGGAGAGGG
GCTGCTCACA GTGATCCGGG CGAGCGGTGG TTGCGTTCGC GATGCAGCGC TTTATTGGGA
GCACAGCCAG AAGAGCTTGC TCGTCAGAAT ATGTCGAGTT GTATTGTTGC GGCGGCAGCC
TGA
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| Protein sequence | MMNRNDLRRA DINLLVVFET MMHEQNVSRV GEKLFLGQPA VSAALGRLRH LFDDPLFIRT
GRVMEPTSRA QEIFSNLTPA LDSIAAALGK CQTFDPTTSE ATFHIGLSDD VEYALLPTLL
RHLRVDAPNI RLVVRRADQW QLPQLLASGE ISLGISHALQ LPANARSKHL RSIRPMLLRA
DSQAGALTLE EFCRRPHAVV SSMGNVIENA DRALHSLGRQ RKVVLAVPQF SALPMLLEGS
SMIAIVPEYV AQAMSGSGGL RAEAVPVVLP QQELSMVWRG AAHSDPGERW LRSRCSALLG
AQPEELARQN MSSCIVAAAA
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