| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1143 |
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| Symbol | |
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| ID | 5108116 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1287332 |
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| End bp | 1288186 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640502367 |
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| Product | ThiJ/PfpI domain-containing protein |
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| Protein accession | YP_001186642 |
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| Protein GI | 146306177 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0693] Putative intracellular protease/amidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.505852 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAGA AGACCACCCT CGCCGTCGCC GTTGCCGGCT CCCTGCTGGC AGGCAGCGCC
CTGGCTGCCG GCAAGGGCGA AGTACTGGTG CTGTTGTCGA GCGAAACGCA ACTGCCACTC
AAGGATGGCA AGCAGTACAC CACCGGGTTC TACCTCAACG AGTTCGGCGT CCCCGCCGAC
CATCTGCTCA AGGCGGGCTA CGAACTGGTG CTGGTCACGC CCAAGGGCAA TGCCCCGCGT
GTCGATGAGA ACTCGGTAAC CCCGCAGTAC TTCGGCGGCG ACGAGCAGGA GATGCAGCGC
ATCCGCAGCC TGGTGGAAAA CCTGCCGGGC ATCGACGACA CGCTGTCGCT CAAGGAAGTG
CTCGAGGGCG ATCTGCAGCG CTACGCCGGC CTGCTGATTC CCGGCGGTCA TGCGCCGCTG
ATCGACCTGG CCAACAACCC CGAGGTCGGC GCCCTGCTGC GTCACTTCCA CCAGGCCGGC
AAGCCCACTG CCGCCATCTG CCACGGCCCG ATCGCCCTGC TCTCGGCGCA GCGCGACCCG
GCGGCCTACC AGGCGGCCTT GGCCAATGGC GAAACACCGG CAGCGGCCGA CTGGATCTAC
CAGGGCTACC GCATGACCAT CTTCTCCACT CCGGAGGAGC AGGTTTTCGA ACAGTCGCTG
CAAGGTGAAC GCATCCTGTT CTACCCGGCC ACCGCGATGG AAAGCGCGGG CGGCGAGCTG
AGCTACACCG AGGCCTGGGC GCCCAACGTG GTCGTGGATC GCGAGCTGAT CACCGGGCAG
AACCCCTTCT CCGACCATGC GCTGGGGAAG AAGCTGGTGC AGATGCTCGA CGCCAAAGGC
CAGCAGGCGC AGTGA
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| Protein sequence | MSKKTTLAVA VAGSLLAGSA LAAGKGEVLV LLSSETQLPL KDGKQYTTGF YLNEFGVPAD
HLLKAGYELV LVTPKGNAPR VDENSVTPQY FGGDEQEMQR IRSLVENLPG IDDTLSLKEV
LEGDLQRYAG LLIPGGHAPL IDLANNPEVG ALLRHFHQAG KPTAAICHGP IALLSAQRDP
AAYQAALANG ETPAAADWIY QGYRMTIFST PEEQVFEQSL QGERILFYPA TAMESAGGEL
SYTEAWAPNV VVDRELITGQ NPFSDHALGK KLVQMLDAKG QQAQ
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