Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1131 |
Symbol | |
ID | 5108104 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 1270024 |
End bp | 1270650 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640502355 |
Product | YceI family protein |
Protein accession | YP_001186630 |
Protein GI | 146306165 |
COG category | [S] Function unknown |
COG ID | [COG2353] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGCCA TGGCGACTAT CGTTGCCGCC TGGTCATGCC GTTTTCGAGT CCTCATGCGC CGTTCGCTTC TCGCCCTGCT GCTTGCTGTC GCCTTCCCCG TTCACGCCGA CTGGTACCTG GACAACGAGT CCTCACGGCT GTCGTTCATC TCCACCCATT CCGGCAGCCA GTCGGAGGTG CATCGCTTTC TCACTCTGCA CGGACAGATC GCCGCCGATG GCCGCGCGCG CCTGCGGGTC GACCTGGATT CGCTGAGCAC CGGCATTGCG CTGCGTGACG AGCGCCTGCG CGCCATGCTG TTCGACACCG CGCGCCTGCC CGAGGCGCGT ATCAACGCGC AGGTCAACCT GGCGCAACTC ACCGACCTGG CGCCCGGTGC CCAGCTGGAA CTGCGCCTGC CGCTGCAACT GGTGCTCAAC GAACACAGGC GCGAGCTGAA TGCCGAACTG CTGGTCACCC GTCTCGACGA TCGGCGCTTC CAGGTGGTGA CGCTGGCGCC GCTGGTGCTG CACGCCGAGG ACTTCGGCCT GGCCAGCGGC ATCGAGGCGC TGCGCAAGAT CGCCGAACTG CCTGCCATCA GCCTGTCGGT GCCGGTCGGC GCCGTGCTGA TCTTCACGGC GCGCTGA
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Protein sequence | MQAMATIVAA WSCRFRVLMR RSLLALLLAV AFPVHADWYL DNESSRLSFI STHSGSQSEV HRFLTLHGQI AADGRARLRV DLDSLSTGIA LRDERLRAML FDTARLPEAR INAQVNLAQL TDLAPGAQLE LRLPLQLVLN EHRRELNAEL LVTRLDDRRF QVVTLAPLVL HAEDFGLASG IEALRKIAEL PAISLSVPVG AVLIFTAR
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