Gene Pmen_1131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1131 
Symbol 
ID5108104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1270024 
End bp1270650 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content67% 
IMG OID640502355 
ProductYceI family protein 
Protein accessionYP_001186630 
Protein GI146306165 
COG category[S] Function unknown 
COG ID[COG2353] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGCCA TGGCGACTAT CGTTGCCGCC TGGTCATGCC GTTTTCGAGT CCTCATGCGC 
CGTTCGCTTC TCGCCCTGCT GCTTGCTGTC GCCTTCCCCG TTCACGCCGA CTGGTACCTG
GACAACGAGT CCTCACGGCT GTCGTTCATC TCCACCCATT CCGGCAGCCA GTCGGAGGTG
CATCGCTTTC TCACTCTGCA CGGACAGATC GCCGCCGATG GCCGCGCGCG CCTGCGGGTC
GACCTGGATT CGCTGAGCAC CGGCATTGCG CTGCGTGACG AGCGCCTGCG CGCCATGCTG
TTCGACACCG CGCGCCTGCC CGAGGCGCGT ATCAACGCGC AGGTCAACCT GGCGCAACTC
ACCGACCTGG CGCCCGGTGC CCAGCTGGAA CTGCGCCTGC CGCTGCAACT GGTGCTCAAC
GAACACAGGC GCGAGCTGAA TGCCGAACTG CTGGTCACCC GTCTCGACGA TCGGCGCTTC
CAGGTGGTGA CGCTGGCGCC GCTGGTGCTG CACGCCGAGG ACTTCGGCCT GGCCAGCGGC
ATCGAGGCGC TGCGCAAGAT CGCCGAACTG CCTGCCATCA GCCTGTCGGT GCCGGTCGGC
GCCGTGCTGA TCTTCACGGC GCGCTGA
 
Protein sequence
MQAMATIVAA WSCRFRVLMR RSLLALLLAV AFPVHADWYL DNESSRLSFI STHSGSQSEV 
HRFLTLHGQI AADGRARLRV DLDSLSTGIA LRDERLRAML FDTARLPEAR INAQVNLAQL
TDLAPGAQLE LRLPLQLVLN EHRRELNAEL LVTRLDDRRF QVVTLAPLVL HAEDFGLASG
IEALRKIAEL PAISLSVPVG AVLIFTAR