| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1129 |
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| Symbol | |
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| ID | 5108102 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1268514 |
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| End bp | 1269632 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640502353 |
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| Product | beta-lactamase |
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| Protein accession | YP_001186628 |
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| Protein GI | 146306163 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATCC TTTCCCTTCG CCATACGAGT CTGCTGCTCG GCCTTGGCCT GCTGGCCGGC
CTCGCCCGGG CCGAGAGTTG GCCGCAACCG GATTGGCAGA CGCTGCCCGC CAGCCGGACT
GCCGCCGTTG CCGACCTGGA AGCCTATGCC TTTGCCCCGC GCGATGAGGT GCAGCGCATC
GGCGTGCGCA GCGATGCGCT GCTGGTGGTG CGTGACGGCC AGATCGTCTA CGAGCGCTAC
GCGGCGCCGA CCACGGCGCA AACCGCGCAC CTGACCTGGT CGATGGCCAA GAGCCTGCTG
GCCACCACCC TGGGTGTGGC CTACGGCGAA GGGCGCTTCA AGCTCGATGC GCCGGTGGCC
AAGTACTATC CGGCGATGGC CGGGCATCCG CAGATCAAGA TCGGTCACCT GCTCAACTGG
GCCTCGGGCC TGGCCTGGGA GGAAGACTAC GAATACGCGC CGCTGAAGTC CTCGGTGGTG
GCCATGCTCT ACACCCGCGG CCGCGGCGAC ATGGCGGCCT TTACCGCCGC GCATGCCGCC
GATGCCGCGC CCGGCACGCG CTTTCGTTAT TCCAGCGGCG ACAGCAATGT GCTGGCGGCG
GCCTTGCGCG GCATGGTCGG CGAGCAGGCC TACGCCGACT ACCCCTGGAC GGCACTGTTC
GAGCCGCTGG GTATCGACAG CGCGGTGTGG GAGCGCGACG GCGCCGGTAC CTTCGTCGGC
TCCTCCTACG CCTACATGAG CGCCCGCGAT CTGGCTCGCG TGGGCCTGCT GATGCAGCGC
GGCGGGCGCT GGGGCGAGCG TCAGCTGCTG CCAGAGGCCT GGGTGGCGTT CGTCAGCACC
CCCTTTGCCG GCTACCAGCC GCAACTGGCC AAGCCGGGCG ATGCCGTGCC GGGCGGGCAT
TGGTGGCTCA ACGCCGAACT GCCGGGCAGC CGGCGCCCCT GGCCGGACGC ACCGGCCGCG
ACCATTGCGG CGCTGGGACA CTGGGGCCAG GGCCTGTACG TGCTGCCCGA GGACAAACTG
GTGGTGGTGC GCTATGCCGA TGACCGCGAT GCCAGCTTCA ACCACAACGA ACTGCTCAAG
CGCGTGCGTG CGGCCTTCGC CGAAGAGGTG CAGCCATGA
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| Protein sequence | MSILSLRHTS LLLGLGLLAG LARAESWPQP DWQTLPASRT AAVADLEAYA FAPRDEVQRI
GVRSDALLVV RDGQIVYERY AAPTTAQTAH LTWSMAKSLL ATTLGVAYGE GRFKLDAPVA
KYYPAMAGHP QIKIGHLLNW ASGLAWEEDY EYAPLKSSVV AMLYTRGRGD MAAFTAAHAA
DAAPGTRFRY SSGDSNVLAA ALRGMVGEQA YADYPWTALF EPLGIDSAVW ERDGAGTFVG
SSYAYMSARD LARVGLLMQR GGRWGERQLL PEAWVAFVST PFAGYQPQLA KPGDAVPGGH
WWLNAELPGS RRPWPDAPAA TIAALGHWGQ GLYVLPEDKL VVVRYADDRD ASFNHNELLK
RVRAAFAEEV QP
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