Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1125 |
Symbol | |
ID | 5108098 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 1264776 |
End bp | 1265549 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640502349 |
Product | lyso-ornithine lipid acyltransferase |
Protein accession | YP_001186624 |
Protein GI | 146306159 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase |
TIGRFAM ID | [TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 0.801082 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAAAC TGCGTCTATT CCTGCGCCTC TTTCATCTGG CCCTGGTGAT CGCTTTCGGC GCACTGCTGG CCGCCATCGT CAGCCTCTGC GAACGAGTGG CCCGGCATGA CCTGATGTCA CTGCGTCAGC GCCTGACGCG CTGGTTCCTC GCGCGCCTCG GCGGCGCCCT GCCCTTTCGC GTGCGGGTCG AAGGCGAGTT GCCCGAGCAG CCGATGCTCT GGGTCGCCAA CCATGTGTCC TGGACCGACA TCCCGCTGCT CGGTGCGCTA CAGCCGATCT CCTTTCTGTC CAAGGCCGAG GTACGCGCCT GGCCGCTGGC CGGCTGGCTG GCGCACAAGG CCGGGACCCT GTTCATCCGC CGCGGGGCGG GCGACAGCAA TTTGGTTGGC CAGCAGTTGA CCCGCCATCT GCAACTCGGC CGTCACCTGC TGATCTTCCC GGAAGGCACC ACCACCGACG GCCTGACCTT GCGCACCTTC CACGGCCGCC TGCTGGCGAG CGCCATCGAC AGCGGCGTGG CCGTGCAGCC GGTGGCCATT CGTTACCTGC GCGGTGGCCA GCCCTGCCCG GTGGCGCCCT TCGTCGGCGA CGACGACATG CTCTCGCACC TGCTGCGCCT GCTCTCCAGC CCGGCCGGCG AGGTGGAGAT ACACCTGCTT TCGCCGATCC CCAGCGAATC GCGCAGCCGC AACGAACTGG CCCGCCACAG CCAGGCGATC ATCGCCAGCG CCCTGCAGCT GCACGCACCG CAGGAGCAAG CAGAGGCGGC GTGA
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Protein sequence | MAKLRLFLRL FHLALVIAFG ALLAAIVSLC ERVARHDLMS LRQRLTRWFL ARLGGALPFR VRVEGELPEQ PMLWVANHVS WTDIPLLGAL QPISFLSKAE VRAWPLAGWL AHKAGTLFIR RGAGDSNLVG QQLTRHLQLG RHLLIFPEGT TTDGLTLRTF HGRLLASAID SGVAVQPVAI RYLRGGQPCP VAPFVGDDDM LSHLLRLLSS PAGEVEIHLL SPIPSESRSR NELARHSQAI IASALQLHAP QEQAEAA
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