Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1123 |
Symbol | |
ID | 5108096 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 1261074 |
End bp | 1263788 |
Gene Length | 2715 bp |
Protein Length | 904 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640502347 |
Product | ATPase, P-type (transporting), HAD superfamily, subfamily IC |
Protein accession | YP_001186622 |
Protein GI | 146306157 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0474] Cation transport ATPase |
TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC [TIGR01517] plasma-membrane calcium-translocating P-type ATPase [TIGR01523] potassium and/or sodium efflux P-type ATPase, fungal-type |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.91137 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACACTC GGCTCCCTGA AAACTCTGAC AGCGCCTGGC ACCAACTGAC TCCGCAACAA GCGTTGGACG CCCAACAGAG CAGCCAGACC GGTCTCAGCG ACGCAGAGGC CAGCGCCCGC CTGCAGCGCC ATGGCCCCAA TCGCCTGCCG CCGCCCAAGC GACGCGGCCC TTTGTTGCGT TTGCTGTATC AGTTCCACAA CGTGCTGCTG TACATGATGA TGGCCGCCGC CCTGGTCACC GCCCTGCTCG GCCACTGGGT CGATACCGGG GTGATCCTCG CCGCCGTGCT GATCAACGTG GTGATCGGCT TCATCCAGGA AGGCAAGGCG GAGAATGCCC TCGACGCCAT CCGCAGTCTG CTGTCGCCGC ACGCCCTGGT GCTGCGCGGC GGCGAACGCC GCGAGATCGA CGCCGAACAG CTGGTGCCCG GCGACATCGT CCTGCTCGCC TCCGGCGACA AGGTGCCGGC CGACCTGCGC CTGATCAGCG TGAAGAACCT GCTGGTGGAA GAAGCGGCGC TGACCGGCGA ATCGCTGCCG GTGGAAAAGT CCCTGGCCCA TTGCCAGGCG GATGCGGCGC TGGGCGACCG GCGCTGCATG GCCTATTCCG GCACCCTGGT GGCCAGCGGT CAGGCCAGCG GGGTGGTGGT GGCTACCGGT GCGGGTACCG AGCTGGGCCG CATCGGCGCC ATGCTGCAGC AGGTGCAGGC AATGACCACG CCGCTGCTGC GGCAGATCGA GCAGTTCAGC CGCTGGCTGG CGCTGGCCAT TCTGATCTTC GCCATGGCCA CCTTCGCCCT CGGCACCTTC TGGCACGGCC AGGACCCGGC CGAGATGTTC ATGATGGTGG TGGCGCTGAC TGCCGCCGCC ATCCCCGAAG GCCTGCCGGC ACTGATGACG GTGATCCTCG CCCTCGGCGT GCAGCGCATG GCCGGGCGCA ACGCCATCGT GCGGCGTCTG CCGGCGGTGG AAACCCTCGG CTCGGTAACG GTGATCTGCT CGGACAAGAC CGGCACCCTG ACGCGCAACG AAATGACCGT GCAACGCCTG GTCAGCGCCA GCCGGGTGCT CGACGTCAGC GGCGTCGGCT ATGCCCCGGA GGGCGCCTTC CATCTCGACG GCGCGCTGGT CGAGCCGGAT GCCGCGCTGC TGGAAATCGC CCGCGCCGCC ACCCTGTGCA ACGACGCCCA GCTGCAGCAG GACGCCGCCG GAACCTGGCG CCTGCAGGGC GACCCCACCG AGGGCGCGCT GCACACCCTG GCGTTGAAGG CCGGGCTGGA TACCCCGACG CTGAACCTGC AGTTGCCGCG TAGCGACACC ATCCCCTTCG AGTCCGAGCA CCGCTTCATG GCCAGCCTGC ACCATGACCA CCAGGGGCAT GGCGTGATCT ACCTCAAGGG CGCGCCTGAG CGCCTGCTGG AGATGTGCAG CGGCCAGCGC GATGCCGGCG GCGGCGTGCA ACCGCTGGAC GCCGACTACT GGCGGCGCCA GGCCACCGAT CTGGCGGCCC GCGGCCTGCG CCTGCTGGCC ATCGCCAGCC GCACGGTGAG CGCCGAGCAG CGCAGCCTGA GCTTCGCCGA GGTGGAACAG GACATGTGCC TGCTGGCCCT GGTCGGCATC ATCGACCCAC CGCGCGAGGA AGCCATCGCC GCCGTCGCCG AATGCCAGCG CGCCGGCATC CGGGTGAAGA TGATCACCGG CGACCACGCC GAAACCGCCC GCGCCATCGG CGCCCAGCTG GGTATCGGCA TCGGCCTGCC GGCGCTGACC GGCGCGGAGC TGGAACTGCT CGACGAGCGC CGTCTGCGCG AGGTGCTGCC CGGCGTCGAG GTATTCGCCC GCGCCAGCCC CGAGCACAAG CTGCGCCTGG TGCAGGCCAT GCAGGCCAGC GGCGAGGTGG TGGCGATGAC CGGCGACGGC GTCAACGACG CACCGGCCCT CAAGCGCGCC GACGTTGGCG TGGCCATGGG CGACAAGGGC ACCGAGGCGG CCAAGGAGGC AGCCGAAGTG GTGCTGGCCG ACGACAACTT CGCCACCATC GCCGGCGCCG TGCGCGAGGG CCGGGCGATC TACGACAACC TGAAGAAGTT CATCCTCTTC GCCCTGCCCA CCAACGGCGG CCAGGCGCTG ATCGTGATCG CCGCCATCCT GTTCCAGCTG ACCCTGCCGC TGACCCCGGC GCAGGTGCTG TGGATCAACA TGGTCACCTC GGTGACCCTG GGCCTGGCGC TGGCCTTCGA ACCGGCCGAG GCCGGGCTGA TGGACCGTCC GCCGCGGGCG CCGGACGAGC CCTTGCTGTC GGGCTTGTTC GTCTGGCGCG TGCTGCTGGT GTCGCTGCTG ATGGCCGGTG CCGGCATCGG CCTGTTCCTC TGGGAACTGC AGCAGGGCAC CGGGCTGGAC AGCGCAAGGA CCATGGCGCT GAACGCGGTG GTGATGTGCG AGGTGTTCTA CCTGATCAAC AGCCGGCGCA TCTTCGCCTC GGTGCTCAGC CTCGACGGCC TGCTGGGCAG CCGCGCGGTG CTGCTGGCGA TCGCCGCCTG TCTGCTGCTG CAGGCGCTGT ACACCTACGC GCCGCCGATG CAGCGGCTGT TCAATTCCAC CGCGCTGGAT GCGGCGCAGT GGGCGCGCGT GGTGCTGGCC GGGCTGGCGG TGTTCTGCAT CGCCGAGCTG GAGAAATGGG TGATTCGTCG TTGGCACCTG CAGCCGAGCG GGTGA
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Protein sequence | MDTRLPENSD SAWHQLTPQQ ALDAQQSSQT GLSDAEASAR LQRHGPNRLP PPKRRGPLLR LLYQFHNVLL YMMMAAALVT ALLGHWVDTG VILAAVLINV VIGFIQEGKA ENALDAIRSL LSPHALVLRG GERREIDAEQ LVPGDIVLLA SGDKVPADLR LISVKNLLVE EAALTGESLP VEKSLAHCQA DAALGDRRCM AYSGTLVASG QASGVVVATG AGTELGRIGA MLQQVQAMTT PLLRQIEQFS RWLALAILIF AMATFALGTF WHGQDPAEMF MMVVALTAAA IPEGLPALMT VILALGVQRM AGRNAIVRRL PAVETLGSVT VICSDKTGTL TRNEMTVQRL VSASRVLDVS GVGYAPEGAF HLDGALVEPD AALLEIARAA TLCNDAQLQQ DAAGTWRLQG DPTEGALHTL ALKAGLDTPT LNLQLPRSDT IPFESEHRFM ASLHHDHQGH GVIYLKGAPE RLLEMCSGQR DAGGGVQPLD ADYWRRQATD LAARGLRLLA IASRTVSAEQ RSLSFAEVEQ DMCLLALVGI IDPPREEAIA AVAECQRAGI RVKMITGDHA ETARAIGAQL GIGIGLPALT GAELELLDER RLREVLPGVE VFARASPEHK LRLVQAMQAS GEVVAMTGDG VNDAPALKRA DVGVAMGDKG TEAAKEAAEV VLADDNFATI AGAVREGRAI YDNLKKFILF ALPTNGGQAL IVIAAILFQL TLPLTPAQVL WINMVTSVTL GLALAFEPAE AGLMDRPPRA PDEPLLSGLF VWRVLLVSLL MAGAGIGLFL WELQQGTGLD SARTMALNAV VMCEVFYLIN SRRIFASVLS LDGLLGSRAV LLAIAACLLL QALYTYAPPM QRLFNSTALD AAQWARVVLA GLAVFCIAEL EKWVIRRWHL QPSG
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