| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1108 |
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| Symbol | |
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| ID | 5108081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1244408 |
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| End bp | 1245658 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640502332 |
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| Product | arginine deiminase |
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| Protein accession | YP_001186607 |
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| Protein GI | 146306142 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2235] Arginine deiminase |
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| TIGRFAM ID | [TIGR01078] arginine deiminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.279691 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAAGA AAGCCCTAGG CGTTCATTCC GAAGCCGGCA AACTGCACAA GGTGATGGTC
TGTTCGCCAG GCCTGGCTCA CCTGCGCCTG ACCCCGAACA ACTGCGACGA ACTGCTGTTC
GACGACGTGA TCTGGGTGTC CCAGGCCAAG CGCGACCATT TCGACTTCAT GACCAAGATG
CGCGAGCGCG GTATCGAGGT GGTGGAGATG CACAACCTGC TGGAAGAGAC CGTGCGCGAC
CCGCAAGCGC TGAAGTGGAT TCTCGACCGC AAGATCACCC CCAACAGCGT GGGACTCGGC
CTGCAGGGCG AGGTGCGCTC CTTCATCGAG GGCCTGGAGC CACGACGTAT CGCCGAATTC
CTGATCGGCG GCGTGTCCGG TGCCGACCTG GCCAAACACA AGGATTCCGA GGCGGCGAAG
ATGTTCAATG CCTACCTGGG TGAATCCAGC TTCATCTTCC CGCCGCTGCC CAACACCCAG
TTCACCCGTG ACACCACCTG CTGGATCTAC GGCGGCGTCA CCCTCAACCC GATGTACTGG
CCGGCGCGCC GTCAGGAGAC CCTGCTCACC TCGGCCATCT ACAAGTTCCA CCCGGACTTC
GCCGGCGAGC AGTTCGAAAT CTGGTACGGC GACCCGGACC AGGACCATGG CGCAGCGACG
CTGGAAGGCG GCGACGTGAT GCCCATCGGC AACGGCACCG TGCTGATCGG CATGGGCGAG
CGCACCTCGC ACCAGGCCAT CGGCCAGGTG GCGCGCGCCC TGTTCGCCAA GGGCGCGGCG
CAGCGGGTGG TGGTGGCCGG GCTGGGCAAA TCGCGCGCGG CGATGCACCT GGACACCGTG
TTCAGCTTCT GCGACCGCGA CCTGGTCACC ATCTTCCCCG AAGTGGCCAA CTCCATCGTG
CCCTTCAGCC TGCGCCCGGA CGAGAGCCGT CCCGGCGGCA TCGACGTGCG CCGTGAGGAC
AAGTCCTTCC TCGACGTGGT CGCCGAATCG CTCAACCTGC CGAAGCTGCG CGTGGTGGAA
ACCGGCGGCG ATGCCTACGA GGCCGAACGC GAGCAATGGG ACGACGGCAA CAACGTGGTC
TGCCTGGAGC CGGGCGTGGT GGTCGGTTAC GACCGCAACA CCTACACCAA TACGCTGCTG
CGCAAGGCCG GTGTGGAAGT CATCACCATC AGCGCCAGCG AGCTGGGTCG TGGCCGTGGC
GGCGGCCACT GCATGACCTG CCCGATCATC CGCGACCCGA TCGATTACTG A
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| Protein sequence | MSKKALGVHS EAGKLHKVMV CSPGLAHLRL TPNNCDELLF DDVIWVSQAK RDHFDFMTKM
RERGIEVVEM HNLLEETVRD PQALKWILDR KITPNSVGLG LQGEVRSFIE GLEPRRIAEF
LIGGVSGADL AKHKDSEAAK MFNAYLGESS FIFPPLPNTQ FTRDTTCWIY GGVTLNPMYW
PARRQETLLT SAIYKFHPDF AGEQFEIWYG DPDQDHGAAT LEGGDVMPIG NGTVLIGMGE
RTSHQAIGQV ARALFAKGAA QRVVVAGLGK SRAAMHLDTV FSFCDRDLVT IFPEVANSIV
PFSLRPDESR PGGIDVRRED KSFLDVVAES LNLPKLRVVE TGGDAYEAER EQWDDGNNVV
CLEPGVVVGY DRNTYTNTLL RKAGVEVITI SASELGRGRG GGHCMTCPII RDPIDY
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