| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1102 |
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| Symbol | |
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| ID | 5108075 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1238300 |
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| End bp | 1238869 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640502326 |
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| Product | thioesterase superfamily protein |
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| Protein accession | YP_001186601 |
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| Protein GI | 146306136 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
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| TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.218192 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.0165353 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGAGC ACAACCGTGA TACCTGCCTG GCCGCCTGGA TCGCAGAGGA ACAGGCCGCG
CGCGACCGAC TCGCCGCCCC GGGCACCCTG GCCCTGGCGG AAGTGGCTGG CATGGCGCCG
CTGGATTTCT TCGACGCCAT CGGCCGCGGC GAACTGCCCA GCCCACCCTT CGGCCAATTG
CTGGATTTCG TGCCGCTGCA ATGGTCCCGC GGTCGCTTCG TGTTCCAGGG CACGCCGGAC
GGTCGCCACT ACAACCCGCT GGGCAGCGTG CACGGTGGCT ATATCGCCAC CCTGCTCGAC
TCCTGCATGG GTTGCGCGGT GCACACCCTG CTCAAGCCCG GCCAGGGCTA CACCACCGCC
GACCTGCGCG TCAGCTACAT CCGCGCGCTG CGCAGCGAGT CCGGCCCGGT GCGCGCCGAG
GGCAACCTCA TCCATGTCGG TCGTTCCACC GCCCTGGCCG AGGGGCGCCT GTACGACGTC
GACGACCGTC TTTATGCGGT GGCTTCCACC ACCTGCCTGA TTCTCGACAT GAACGGCACG
CGCCAGAACC GCGAGGTGGG TGTAAGATGA
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| Protein sequence | MNEHNRDTCL AAWIAEEQAA RDRLAAPGTL ALAEVAGMAP LDFFDAIGRG ELPSPPFGQL
LDFVPLQWSR GRFVFQGTPD GRHYNPLGSV HGGYIATLLD SCMGCAVHTL LKPGQGYTTA
DLRVSYIRAL RSESGPVRAE GNLIHVGRST ALAEGRLYDV DDRLYAVAST TCLILDMNGT
RQNREVGVR
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