| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1101 |
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| Symbol | |
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| ID | 5108074 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1237702 |
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| End bp | 1238268 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640502325 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_001186600 |
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| Protein GI | 146306135 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.205673 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.0164026 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTATT CGGAAGACCA CAAGGCCAAG ACCCACCAAC GCATCATCGA CGAGGCGGCG
CTGCGTTTTC GCCGCGACGG CATCGGCGCC ACCGGCCTGC AGCCGCTGAT GAAGGCCCTG
GGCCTGACCC ACGGCGGCTT CTACGCCCAC TTCAAGTCCA AGGACGACCT GGTGGAGACC
GCCCTGCGCC ACGCCGCAGA GGAGCTCACA GCCACCAGCG AGGCCCTGGC CAAGGATGCC
GAGGAGCCGC TGACGCGCTT TATCGCCAGC TACCTGTCCA GCGCGCACCG TGCCAACCCG
GGCGCAGGCT GCCCGTTGCC GACCATGTCG GCCGAGCTGG GCCAGCGTGG CGAAGCCAGC
GAAATCACCG ATGCGTTGAT CCGCGACCGC CTGGCATTGA TCGAAGAGAA CCTTCCGGGA
GATGACGCCG CCGAGCAGAG CGTGCTGCTG CTCTCGGCCA TGGTCGGCGC CCTGCTGCTG
TCGCGCAGCG TCAAGGACCC CGAGCTGTCC GACCGCCTGC TCAAGACCAC CCGCCGCCGG
TTGATCGAAC AGGCGCAGGG CCGATAA
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| Protein sequence | MRYSEDHKAK THQRIIDEAA LRFRRDGIGA TGLQPLMKAL GLTHGGFYAH FKSKDDLVET
ALRHAAEELT ATSEALAKDA EEPLTRFIAS YLSSAHRANP GAGCPLPTMS AELGQRGEAS
EITDALIRDR LALIEENLPG DDAAEQSVLL LSAMVGALLL SRSVKDPELS DRLLKTTRRR
LIEQAQGR
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