| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1098 |
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| Symbol | |
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| ID | 5108071 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1234268 |
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| End bp | 1235032 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640502322 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001186597 |
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| Protein GI | 146306132 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.041078 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.0345837 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTACGCA TGCTGTTGTG TCTGTTCGCT GTGCTGCTCG CCCAACCGGG CACGGCAGGA
CCGTTGCGGG TCGCCATGGA GGGACAGTTC CCGCCTTTCG AAGAACTCGA TGCGCAGGGC
AATCTGGTCG GCTTCAACGT CGACATCGCC AATGCCCTGT GTCAGCGCAT GCAGCGCGAA
TGCGAACTGC AGCGCTTCGC CTGGGATGAC CTGATCCCGG CACTCGATGC GGGACGCGCG
GACCTGATCC TGGCGTCCAT GTCGATCACC GCGGCGCGCG CCGAACGGGT GGACTTCACC
GCCCGCTATG CCCAGACCCC GGCCTTTTTC TTTGCCCGCA AGGGCCATAT CAATCAGATG
CTGATCACCC CGCGGCGCAT CGCCGGCAAG CGCGTCGGCG TGCAGCAGGG CACCACCTAC
GAGCGCTTTC TCGAGGCCCG CTTCGCCGAG CATGTGCAGC TGCTGCGCTA TCCCAGTGCC
GCCCAGGCCT ACCGGGCGCT CGCAGGCGGC GAGCTGGATC TGGTGCTCGA CGACGCCGTT
TCCGGTTACT TCGGCTTCCT TCTGACCGAA CTGGGCCGCG ACTTCGAGCA GGTCGGCGGC
CCCGTGGTGG CGCCGCAGTT CTTCGGCCAG GGGCAGGGCA TCGCCGTGCG CAAGGGTGAC
GACGAGCTGC GCGAACAGCT CGATCGGGCG CTGGCCGCGA TCCTTGCCGA CGGCACCCAC
AAGCGCATCG AGAAACGCTA CTTCAAACAG TTTTCCGTTT ACTGA
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| Protein sequence | MLRMLLCLFA VLLAQPGTAG PLRVAMEGQF PPFEELDAQG NLVGFNVDIA NALCQRMQRE
CELQRFAWDD LIPALDAGRA DLILASMSIT AARAERVDFT ARYAQTPAFF FARKGHINQM
LITPRRIAGK RVGVQQGTTY ERFLEARFAE HVQLLRYPSA AQAYRALAGG ELDLVLDDAV
SGYFGFLLTE LGRDFEQVGG PVVAPQFFGQ GQGIAVRKGD DELREQLDRA LAAILADGTH
KRIEKRYFKQ FSVY
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