Gene Pmen_1069 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1069 
Symbol 
ID5107728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1206786 
End bp1207541 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content70% 
IMG OID640502293 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001186568 
Protein GI146306103 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGTA TCTGGCTGAC CGGCGCCAGC AGCGGCATCG GTGCCGCACT GGCGGAAGAA 
CTGCTGCGCG CCGGCCACCG CCTGGCGCTC AGCGCGCGCA GCAGCGGCCC GCTGCAGGCG
TTCGCCGCCC GCTATGGCGA GCGGGTGCTG GTGGCCCCGG GCGACCTGAC CGACGCCGAG
CAGGTGCGCG CCATCGGCGA GCGCATCGAG CAGGTGTGGG GCGCCCTGGA TTGCGTGATC
CTCAATGCCG GCACCTGCGA GTACGTCGAG GTGCGCCAGT TCGAGGCCGC GATGATCGAG
CGGGTGATGC GCGCCAACCT GTTCTCCGCC GGCTACTGCC TCGAGGCCGC CCTGCCCCTG
CTGCGCCGCG GCGAAGGCCC GCATCTGGTC GGCGTCGGCA GCTCGGTGAC CTTCATGCCG
CTGCCCCGTG CCGAAGCCTA CGGCGCCTCC AAGGCAGCCA TGCGCTACCT GCTGCAGACC
CTGCGCATCG ACCTGGCGGC CGAGGGCATC GACGTTACCC TGGTCAGCCC CGGTTTCGTC
GACACGCCGC TGACGCAGAA GAACGACTTC CCCATGCCCA TGCGCTGGCC GGTGGAGCGC
GCCGCACGGT ACATCGCCGA ACGCCTGGAC AAGCGCCCGC ACGAAATCGC CTTCCCTACT
CCCTTCATCG CCGTACTGAA ACTGCTCGGC AGCCTGCCCA GCAGGCTGCA ACTGGCCATC
GGCCGTCGCC TGGCGCGTAA CGAGGACACT CCATGA
 
Protein sequence
MKRIWLTGAS SGIGAALAEE LLRAGHRLAL SARSSGPLQA FAARYGERVL VAPGDLTDAE 
QVRAIGERIE QVWGALDCVI LNAGTCEYVE VRQFEAAMIE RVMRANLFSA GYCLEAALPL
LRRGEGPHLV GVGSSVTFMP LPRAEAYGAS KAAMRYLLQT LRIDLAAEGI DVTLVSPGFV
DTPLTQKNDF PMPMRWPVER AARYIAERLD KRPHEIAFPT PFIAVLKLLG SLPSRLQLAI
GRRLARNEDT P