Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1067 |
Symbol | |
ID | 5107726 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 1204742 |
End bp | 1205542 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640502291 |
Product | hypothetical protein |
Protein accession | YP_001186566 |
Protein GI | 146306101 |
COG category | [S] Function unknown |
COG ID | [COG3496] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACAGCG CCCTGTACAG CGGTTGGGTG CAGCATCGCC GCTTCGCCCC GCGCGCGCAT GCCTTTCGCT ATCGCATGGG CCTGTTGTAC CTCGACCTGA GCGAACAGGC GCAGCTGTTC GCCCTCTCCA AGCTGGCCGG CGCCGGCCGC TTCGCGCCAT TCGCCTTCCG TGAAACCGAC TACCTGCCCG AGTCCACCCG CCAGGGCATG GCGCTGCACG AGGCCGTGCG CAATCGGGTA GAGCAGGCAC TGGGCACGCG CCCGCAAGGT CGCATCTGCG TGCTGACGCA GCCACGCAGC TGGGGCCTGG CCTTCAACCC GGTGAGCATC TTCTACTGTC ACGACGCCGC AGAGCGCCTG GTGGCCATCC TCTGCGAAGT CAGCAATACG CCATGGCGCG AGCGTTATCA CTACGTGCTG CCGGCAGAGG GTGACGGGCG CCACCAGGTC AGCGTGGACA AGGCCTTCCA CGTTTCGCCC TTTCTGCCGC GCGAGCTGGA GTACCGCATG AGCTTCAGCG CGGTGGGCGA ACGCCTCGGC GTGCACATGG CCGACTGGCA GGGCGCGACC AAGCTGTTCG ACGCCAGCCT CAGCCTGCAC CGCCAGCCCC TGGATCGCGC CAGCCTGCAC CGCTATCTGC TCAGCTTTCC CTGGATGACC GGCAAGACCC TGGCGGCCAT CTACTGGCAG GCGCTGCGCC TGCTGTTCAA GCGCATACCG ATCTTCGACC ACTCCCCCGC GGAAGGCAGC TTCCGCGTTG CCCGCCCGCA CGTGAAGGAC TTGCCCCATG AAGAGCTCTA G
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Protein sequence | MHSALYSGWV QHRRFAPRAH AFRYRMGLLY LDLSEQAQLF ALSKLAGAGR FAPFAFRETD YLPESTRQGM ALHEAVRNRV EQALGTRPQG RICVLTQPRS WGLAFNPVSI FYCHDAAERL VAILCEVSNT PWRERYHYVL PAEGDGRHQV SVDKAFHVSP FLPRELEYRM SFSAVGERLG VHMADWQGAT KLFDASLSLH RQPLDRASLH RYLLSFPWMT GKTLAAIYWQ ALRLLFKRIP IFDHSPAEGS FRVARPHVKD LPHEEL
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