Gene Pmen_1067 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1067 
Symbol 
ID5107726 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1204742 
End bp1205542 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content67% 
IMG OID640502291 
Producthypothetical protein 
Protein accessionYP_001186566 
Protein GI146306101 
COG category[S] Function unknown 
COG ID[COG3496] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACAGCG CCCTGTACAG CGGTTGGGTG CAGCATCGCC GCTTCGCCCC GCGCGCGCAT 
GCCTTTCGCT ATCGCATGGG CCTGTTGTAC CTCGACCTGA GCGAACAGGC GCAGCTGTTC
GCCCTCTCCA AGCTGGCCGG CGCCGGCCGC TTCGCGCCAT TCGCCTTCCG TGAAACCGAC
TACCTGCCCG AGTCCACCCG CCAGGGCATG GCGCTGCACG AGGCCGTGCG CAATCGGGTA
GAGCAGGCAC TGGGCACGCG CCCGCAAGGT CGCATCTGCG TGCTGACGCA GCCACGCAGC
TGGGGCCTGG CCTTCAACCC GGTGAGCATC TTCTACTGTC ACGACGCCGC AGAGCGCCTG
GTGGCCATCC TCTGCGAAGT CAGCAATACG CCATGGCGCG AGCGTTATCA CTACGTGCTG
CCGGCAGAGG GTGACGGGCG CCACCAGGTC AGCGTGGACA AGGCCTTCCA CGTTTCGCCC
TTTCTGCCGC GCGAGCTGGA GTACCGCATG AGCTTCAGCG CGGTGGGCGA ACGCCTCGGC
GTGCACATGG CCGACTGGCA GGGCGCGACC AAGCTGTTCG ACGCCAGCCT CAGCCTGCAC
CGCCAGCCCC TGGATCGCGC CAGCCTGCAC CGCTATCTGC TCAGCTTTCC CTGGATGACC
GGCAAGACCC TGGCGGCCAT CTACTGGCAG GCGCTGCGCC TGCTGTTCAA GCGCATACCG
ATCTTCGACC ACTCCCCCGC GGAAGGCAGC TTCCGCGTTG CCCGCCCGCA CGTGAAGGAC
TTGCCCCATG AAGAGCTCTA G
 
Protein sequence
MHSALYSGWV QHRRFAPRAH AFRYRMGLLY LDLSEQAQLF ALSKLAGAGR FAPFAFRETD 
YLPESTRQGM ALHEAVRNRV EQALGTRPQG RICVLTQPRS WGLAFNPVSI FYCHDAAERL
VAILCEVSNT PWRERYHYVL PAEGDGRHQV SVDKAFHVSP FLPRELEYRM SFSAVGERLG
VHMADWQGAT KLFDASLSLH RQPLDRASLH RYLLSFPWMT GKTLAAIYWQ ALRLLFKRIP
IFDHSPAEGS FRVARPHVKD LPHEEL