| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1059 |
|---|
| Symbol | hemA |
|---|
| ID | 5107718 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | + |
|---|
| Start bp | 1197377 |
|---|
| End bp | 1198657 |
|---|
| Gene Length | 1281 bp |
|---|
| Protein Length | 426 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640502283 |
|---|
| Product | glutamyl-tRNA reductase |
|---|
| Protein accession | YP_001186558 |
|---|
| Protein GI | 146306093 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0373] Glutamyl-tRNA reductase |
|---|
| TIGRFAM ID | [TIGR01035] glutamyl-tRNA reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTTTA TCGCCCTCGG TATCAACCAC AAGACCGCCT CGGTAGAGGT GCGCGAGCGC
GTTGCCTTCA CCCCGGAGCA ACTGGTCGAG GCGTTGCAGC AGCTGTGCCG GCTCACCCCC
AGTCGCGAAG CGGCCATCCT CTCCACCTGC AATCGCAGCG AGCTGTACCT GGAACAGGAC
CAGCTGAGCA GCGACGAAGT GCTCAAGTGG CTGGCCGACT ATCACCGCCT GAGCCTGGAC
GAGCTGCGCG CCTGTGCCTA CGTGCACAGC GAGCAGGACG CGGTGCGCCA TATGATGCGC
GTGGCCTGTG GTCTGGACTC CATGGTGCTC GGCGAGCCGC AGATTCTCGG CCAGCTCAAG
TCCGCCTATG CCGTGGCGCG TGAGGCCGGC ACCGTCGGCC CGCTGCTCGG CCGGCTGTTC
CAGGCCACCT TCAGTACCGC CAAGACCGTG CGCACCGACA CCGCCATCGG CGAGAACCCG
GTTTCCGTGG CCTTCGCCGC GGTCAGCCTG GCCAAGCAGA TCTTCGCCGA CCTGCACCGC
AGCCAGGCGC TGCTGATCGG CGCCGGCGAG ACCATCAGCC TGGTGGCGCG TCACCTGCAC
GATCAGGGCA TCAAGCGCAT CGTCGTCGCC AACCGTACCC TGGAGCGCGC CAGTCAGCTG
GCCGAGCAGT TCGGCGCCCA TGCCGTGCTG CTCTCGGACA TTCCCGACGA ATTGGCGCAC
AGTGACATCG TCATCAGCTC CACTGCCAGC CAGCTGCCGA TTCTCGGCAA GGGCGCGGTG
GAAAGTGCGC TGAAAAAGCG CAAGCACAAG CCGATCTTCA TGGTCGACAT CGCCGTGCCG
CGCGATATCG AGCCGCAGGT GGGCGAGCTG GATGACGTTT ACCTCTATAC CGTCGATGAC
CTGCACGAGG TCATCGAGGA AAACCTCAAG AGCCGCCAGG GCGCGGCGCA GGCCGCCGAG
GAGCTGGTGG CCGCCGGCAC CGAAGATTTC ATGCAGCGCC TGCGCGAGCT GGCCGCGGTC
GACGTGCTCA AGGCCTACCG CCAGCAGGCC GAGCGGCTGC GCGACGAGGA ACTGGCCAAG
GCCCAGCGCA TGCTGGTCAA CGGTGCCAGT GCCGAAGACG TACTGGCGCA ACTGGCCCGC
GGCCTGACCA ACAAGCTGCT GCATGCGCCC AGCGTGCGCA TGAAGAAACT CACCGCCGAG
GGGCGCATCG ACGCGCTCAG CCTGGCCCAG GAATTATTCG CCCTTGACGA GGGCGCGCCG
CAGGACAAGG GTCTGCAATG A
|
|---|
| Protein sequence | MAFIALGINH KTASVEVRER VAFTPEQLVE ALQQLCRLTP SREAAILSTC NRSELYLEQD
QLSSDEVLKW LADYHRLSLD ELRACAYVHS EQDAVRHMMR VACGLDSMVL GEPQILGQLK
SAYAVAREAG TVGPLLGRLF QATFSTAKTV RTDTAIGENP VSVAFAAVSL AKQIFADLHR
SQALLIGAGE TISLVARHLH DQGIKRIVVA NRTLERASQL AEQFGAHAVL LSDIPDELAH
SDIVISSTAS QLPILGKGAV ESALKKRKHK PIFMVDIAVP RDIEPQVGEL DDVYLYTVDD
LHEVIEENLK SRQGAAQAAE ELVAAGTEDF MQRLRELAAV DVLKAYRQQA ERLRDEELAK
AQRMLVNGAS AEDVLAQLAR GLTNKLLHAP SVRMKKLTAE GRIDALSLAQ ELFALDEGAP
QDKGLQ
|
|---|
| |