Gene Pmen_1039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1039 
Symbol 
ID5108661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1177587 
End bp1178498 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content66% 
IMG OID640502261 
Producthypothetical protein 
Protein accessionYP_001186539 
Protein GI146306074 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.371653 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCAC TTAACCATTC CCGCTCGCTG GCTTTCTTCG GCTTGTTGCT GGCCAATCTC 
TGCTGGTCCG GCAATGCCCT GGTGGCGCGT GCCTTCGCCG GTGAGATCGC GCCGTTCACC
TTGTCGTTCT GGCGCTGGTG CCTGGCGCTG GCGCTGCTGC TGCCATTCGT GGCCGTGCCG
CTGTGGCGCC ATCGTGCGGC CGTGGCCAAG GCCGGCTGGC GCTTGCTGGT GCTCGGTGGC
TTGGGCATCG CGGGCTACAA TTCGCTGCTC TACAGCGCCG CGCAAACCAC CGCGGCGATC
AATATCTCGC TGGTCAACAC CTGCCTGCCG CTGGTGACCT TCATCGGCGC CGGACTATTG
CTCAACGAGT GGCCGGCACG CCGCGCCTGG TGGGGCATGC TGGTGGCGGT GGTGGGCCTG
GCGGTGCTGA TCAGTCAGGG ACAGTGGAGC CGTCTGGCCA GCCTGTCGTT CAATCAGGGC
GACCTGATCA TGCTGCTGGC GGTGGTGGAC TGGGCCTTGT ATTCGCTGCT GCTGCGGCGC
TGGGCTGCCT ACCTGCAGCC TATTCCGCCG CTGGCCCTGC TGGGTGTGTT CATCCTGCTC
GGGGTACCGC TGATTCTGCC GTTCTACCTG TACGAACTGG CGCAGGGCGT GCAGCTGGCG
CTGAACGTCG CCAACCTCTC GGCCATCGCC TACACCGCCG TGTTCGCCTC GCTGCTGGCC
TACCTGGCCT GGAACCACGG CATCCGCGTG GTCGGCGCCG CCAAGGCCGC GCTGACCAAC
TACCTGATGC CGGTGTTCAC CGCGCTGCTG GGCTGGGTGC TGCTGAACGA GAGCCTGCAG
CTCTATCACT GGCTTGGCGC CGCGATGATC TTCGGCGGCC TGCTGCTGGC GACCCGGCCG
AGTAAAGCCT GA
 
Protein sequence
MNALNHSRSL AFFGLLLANL CWSGNALVAR AFAGEIAPFT LSFWRWCLAL ALLLPFVAVP 
LWRHRAAVAK AGWRLLVLGG LGIAGYNSLL YSAAQTTAAI NISLVNTCLP LVTFIGAGLL
LNEWPARRAW WGMLVAVVGL AVLISQGQWS RLASLSFNQG DLIMLLAVVD WALYSLLLRR
WAAYLQPIPP LALLGVFILL GVPLILPFYL YELAQGVQLA LNVANLSAIA YTAVFASLLA
YLAWNHGIRV VGAAKAALTN YLMPVFTALL GWVLLNESLQ LYHWLGAAMI FGGLLLATRP
SKA