Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1039 |
Symbol | |
ID | 5108661 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 1177587 |
End bp | 1178498 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640502261 |
Product | hypothetical protein |
Protein accession | YP_001186539 |
Protein GI | 146306074 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.371653 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGCAC TTAACCATTC CCGCTCGCTG GCTTTCTTCG GCTTGTTGCT GGCCAATCTC TGCTGGTCCG GCAATGCCCT GGTGGCGCGT GCCTTCGCCG GTGAGATCGC GCCGTTCACC TTGTCGTTCT GGCGCTGGTG CCTGGCGCTG GCGCTGCTGC TGCCATTCGT GGCCGTGCCG CTGTGGCGCC ATCGTGCGGC CGTGGCCAAG GCCGGCTGGC GCTTGCTGGT GCTCGGTGGC TTGGGCATCG CGGGCTACAA TTCGCTGCTC TACAGCGCCG CGCAAACCAC CGCGGCGATC AATATCTCGC TGGTCAACAC CTGCCTGCCG CTGGTGACCT TCATCGGCGC CGGACTATTG CTCAACGAGT GGCCGGCACG CCGCGCCTGG TGGGGCATGC TGGTGGCGGT GGTGGGCCTG GCGGTGCTGA TCAGTCAGGG ACAGTGGAGC CGTCTGGCCA GCCTGTCGTT CAATCAGGGC GACCTGATCA TGCTGCTGGC GGTGGTGGAC TGGGCCTTGT ATTCGCTGCT GCTGCGGCGC TGGGCTGCCT ACCTGCAGCC TATTCCGCCG CTGGCCCTGC TGGGTGTGTT CATCCTGCTC GGGGTACCGC TGATTCTGCC GTTCTACCTG TACGAACTGG CGCAGGGCGT GCAGCTGGCG CTGAACGTCG CCAACCTCTC GGCCATCGCC TACACCGCCG TGTTCGCCTC GCTGCTGGCC TACCTGGCCT GGAACCACGG CATCCGCGTG GTCGGCGCCG CCAAGGCCGC GCTGACCAAC TACCTGATGC CGGTGTTCAC CGCGCTGCTG GGCTGGGTGC TGCTGAACGA GAGCCTGCAG CTCTATCACT GGCTTGGCGC CGCGATGATC TTCGGCGGCC TGCTGCTGGC GACCCGGCCG AGTAAAGCCT GA
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Protein sequence | MNALNHSRSL AFFGLLLANL CWSGNALVAR AFAGEIAPFT LSFWRWCLAL ALLLPFVAVP LWRHRAAVAK AGWRLLVLGG LGIAGYNSLL YSAAQTTAAI NISLVNTCLP LVTFIGAGLL LNEWPARRAW WGMLVAVVGL AVLISQGQWS RLASLSFNQG DLIMLLAVVD WALYSLLLRR WAAYLQPIPP LALLGVFILL GVPLILPFYL YELAQGVQLA LNVANLSAIA YTAVFASLLA YLAWNHGIRV VGAAKAALTN YLMPVFTALL GWVLLNESLQ LYHWLGAAMI FGGLLLATRP SKA
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