| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1018 |
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| Symbol | |
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| ID | 5108640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1152598 |
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| End bp | 1153494 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640502240 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001186518 |
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| Protein GI | 146306053 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.176999 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.742207 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCGAC ACGATAGTGC GCGCCGCCTG GTCAGCCCCG GCGAGCCCCT ACTCAAGGAA
GCCCTCATGC CTCAACCCAG CGTTCTTATC ACTGGCTGCT CCAGCGGTAT CGGCCGCGCC
CTGGCCGATG CCTTCAAGGC TGGCGGCTAT GCGGTCTGGG CCACGGCGCG CAAGGACAAT
GATCTGGCCG CGCTGCAGCA GGCTGGGTTC AATGCGGTGC AACTGGATGT CAACGATGCC
GACGCGCTGC AGCAACTGGC CACCCGCCTG AACGAAGAGA TCGGCGGCCT CGACGTGCTG
ATCAACAACG CCGGTTACGG CGCCATGGGC CCGCTGCTCG ATGGCGGTGT GGAAGCCATG
CGCAAGCAGT TCGAAACCAA CGTGTTTTCC ATCGTCGGCG TGACCCGTGC CTTCTTCCCG
CTGCTGCGCC GCAGCCGTGG CCTGGTGATC AATATCGGCA GCGTCTCCGG CGTGCTGGTC
ACCCCCTTCG CCGGCGCCTA CTGCGCGTCC AAGGCCGCAG TGCACGCGCT CACCGACGCC
TTGCGCCTGG AGCTGGCGCC CTTCTCCATC GAGGTGATGG AGGTGCAGCC CGGCGCCATC
GCCTCCAGCT TCGGTAGCCA TGCCAGCCAG CAGGCCGAGG CGCTGCTGCG CGAGGACTCG
CCCTGGTGGC CGCTGCGCGA CGGCATCCGT GCCCGCGCCG CCGCCTCGCA GGACAACCCC
ACGCCGGCCA GCGACTTTGC CAGCCAGTTG CTCGCCGCCG TGCAACGCGA CAAACGCCCG
CGCCTGCTGC GCCTGGGCAA TGGCAGCCGC GCCCTGCCGC TGCTCGCCAC GTTGCTGCCC
AAGGCGCTGC TGGAACGCAT CCTGAGCAAG CGTTTCGGCC TGGTACGCAG CCTGTGA
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| Protein sequence | MNRHDSARRL VSPGEPLLKE ALMPQPSVLI TGCSSGIGRA LADAFKAGGY AVWATARKDN
DLAALQQAGF NAVQLDVNDA DALQQLATRL NEEIGGLDVL INNAGYGAMG PLLDGGVEAM
RKQFETNVFS IVGVTRAFFP LLRRSRGLVI NIGSVSGVLV TPFAGAYCAS KAAVHALTDA
LRLELAPFSI EVMEVQPGAI ASSFGSHASQ QAEALLREDS PWWPLRDGIR ARAAASQDNP
TPASDFASQL LAAVQRDKRP RLLRLGNGSR ALPLLATLLP KALLERILSK RFGLVRSL
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