Gene Pmen_1007 details

Gene Information

• Locus tag: Pmen_1007
• Symbol: ilvH
• ID: 5108629
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas mendocina ymp
• Kingdom: Bacteria
• Replicon accession: NC_009439
• Strand: +
• Start bp: 1136199
• End bp: 1136690
• Gene Length: 492 bp
• Protein Length: 163 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 640502224
• Product: acetolactate synthase 3 regulatory subunit
• Protein accession: YP_001186507
• Protein GI: 146306042
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0440] Acetolactate synthase, small (regulatory) subunit
• TIGRFAM ID: [TIGR00119] acetolactate synthase, small subunit

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 0.281332
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 10
• Fosmid unclonability p-value: 0.00000000512539
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGCGACATA TCATCTCCCT GCTGCTGGAA AACGAGCCGG GCGCACTGTC CCGCGTGGTC 
GGTCTGTTCT CCCAGCGTAA CTACAACATC GAAAGCCTCA CCGTTGCGCC AACCGAGGAT 
CCGACGCTGT CGCGCCTGAC CCTCACTACC GTTGGCCATG ACGAGGTGAT CGAGCAGATC 
ACCAAGAACC TCAATAAACT GGTCGAGGTG GTCAAGCTGG TCAACCTGTC GGAAAGCGCC 
CACATCGAGC GCGAGCTGAT GCTGGTGAAG ATCAAGGCCA CCGGCGCCCA GCGCGCCGAG 
GTCAAGCGCA CCACCGACAT CTTCCGCGGC CAGATCGTGG ACGTGACCAG CAGCGTCTAC 
ACCGTGCAGC TGACCGGTAC CAGCGACAAG CTCGACAGCT TCATCCAGGC CATCGGCACC 
GCGTCGATCC TGGAAACCGT GCGCAGCGGT GTCACCGGCA TCGCTCGTGG TGACAAGGTA 
CTGAGCATCT GA 

 

Protein sequence

MRHIISLLLE NEPGALSRVV GLFSQRNYNI ESLTVAPTED PTLSRLTLTT VGHDEVIEQI 
TKNLNKLVEV VKLVNLSESA HIERELMLVK IKATGAQRAE VKRTTDIFRG QIVDVTSSVY 
TVQLTGTSDK LDSFIQAIGT ASILETVRSG VTGIARGDKV LSI