| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1003 |
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| Symbol | |
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| ID | 5108625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1132616 |
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| End bp | 1133296 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640502220 |
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| Product | tetratricopeptide TPR_4 |
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| Protein accession | YP_001186503 |
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| Protein GI | 146306038 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.927358 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000000000000175577 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTGGCAA CAGCGGTGCT GGGTGGTTGC AGTACGGTGC CGCAGGGCTC CATTCCGGTG
GTCGATGCCG GAACTCCCCT GTCGTCCGGC GGTGCCGGTC CGGCACCGAC CCAGGGGCCG
GCAGCCGCAC CGCAGCGTAT CGAGGAGGAC TCCGGTGTGG TGGTCATGGT GCCGCAAGGC
GCCATCTCCG CGCCTTTGCA GACCGATTCG CAGCCGATCA CTTCCAGCGG CGGCCTGACC
TTCGACCCTC CCGTCAGCAG CCAGCCTTCG GCTCCGCAGC AGGGCGGGTT CGGTTCTTCC
GCGCCGAGCA TGCCCAGCGG TATCCCCAGC GGTGGCGGCC TGGCCGCAGA CGAACAGCTC
GATGGTCCTG TGCTGGCCCT GCTGACCACG GCGCAGCAAC AACAGGGCGG CGGTGATCTG
AATGGTGCGG CGTCCAGCCT GGAGCGGGCT CAGCGTATCG CGCCACGTGA GCCGCAGGTG
CTCTACCGTC TGGCCGAGGT GCGTCTGGCC CAGGGGGATG CCGCTCAGGC CGAGCAGCTC
GCCCGCCGTG GCCTGACCTA CGCTGGCGGA CGTCCTGCCC TGCAGGCAGG TCTGTGGGGG
CTGATCGCTC AGGCGCGCGA ACGGCAGGGT GATCCTGCGG GAGCCGCTCA GGCTCGCGAG
CGCGCGAGGG TCAACCTCTG A
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| Protein sequence | MLATAVLGGC STVPQGSIPV VDAGTPLSSG GAGPAPTQGP AAAPQRIEED SGVVVMVPQG
AISAPLQTDS QPITSSGGLT FDPPVSSQPS APQQGGFGSS APSMPSGIPS GGGLAADEQL
DGPVLALLTT AQQQQGGGDL NGAASSLERA QRIAPREPQV LYRLAEVRLA QGDAAQAEQL
ARRGLTYAGG RPALQAGLWG LIAQARERQG DPAGAAQARE RARVNL
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