| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0968 |
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| Symbol | |
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| ID | 5108590 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1093035 |
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| End bp | 1094027 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640502185 |
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| Product | DNA uptake lipoprotein-like protein |
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| Protein accession | YP_001186468 |
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| Protein GI | 146306003 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4105] DNA uptake lipoprotein |
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| TIGRFAM ID | [TIGR03302] outer membrane assembly lipoprotein YfiO |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.579627 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGTGA AACACCTGCT GCTGATCGCC ATCCTCGCCC TCACCGCCGC CTGCTCCTCG
AAGCAGCCGG AGGTCGACGA AAACCTGAGC GAGGTGGAGC TGTACCGGCA GGCCCAGGCC
GACCTGGACA ACCGCAGCTA TACCCAGGCC ATCGCCAAGC TCAAGGCGCT GGAGTCACGC
TACCCCTTCG GCCGTTACGC CGAGCAGGCG CAGCTCGAGC TGATCTACGC CTACTACAAG
AACGTCGAGC CGGAAGCCGC CAAGTCCTCG GCCGAGCGTT TCATTCGTCT GCACCCGCAG
CATGCCAACG TCGACTACGC CTATTACCTC AAGGGCCTGG CCTCCTTCGA CCAGGACCGC
GGCCTGCTGG CGCGCTTCCT GCCGCTGGAC ATGACCAAGC GTGACCCGGG CGCCGCCCGC
GACTCCTACA ACGAGTTCGC CCAGCTCACC AGCCGCTACC CGACCAGCCG CTACGCCCCG
GACGCCAAGC AGCGCATGAT CTACCTGCGC AACCTGCTGG CTGCCTACGA GGTCCATGTC
GGTCACTACT ACCTCAAGCG TCAGGCCTAT GTCGCCGCCG CCAACCGCGG CCGCTACGTG
GTGGAGAACT TTCAGGAAAC CCCCGCCGTG GGCGACGGCC TGGCGATCAT GACCGAAGCC
TATCAGCGCC TGGCCCTGAA CGATCTGGCC GCCACCAGCC TGGAAACCCT CAAGCTCAAC
TACCCGGATC ACCCAAGCCT GGAGAACGGC CAGTTCGTGC CGCGCGAGGA AGAAGCCGAC
GGCCGCTCCT GGCTGGCCAA GGCCACCCTC GGCCTGATCG AAACCGACAC GCCGCTGCCG
CCGGGTGAAA CCCGCGCCAG CCAGGACGTG ATCCGTCAGT ACGAGGACGC CGAGCAGCAG
ATCCCGGCCG AACTGCAGCA GGATGCCAAA ACCGGCGAAA CCGCCAAGAA GCGTTCGATC
TGGAGTTATC TGACTTTCGG CCTGTTCGAC TGA
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| Protein sequence | MQVKHLLLIA ILALTAACSS KQPEVDENLS EVELYRQAQA DLDNRSYTQA IAKLKALESR
YPFGRYAEQA QLELIYAYYK NVEPEAAKSS AERFIRLHPQ HANVDYAYYL KGLASFDQDR
GLLARFLPLD MTKRDPGAAR DSYNEFAQLT SRYPTSRYAP DAKQRMIYLR NLLAAYEVHV
GHYYLKRQAY VAAANRGRYV VENFQETPAV GDGLAIMTEA YQRLALNDLA ATSLETLKLN
YPDHPSLENG QFVPREEEAD GRSWLAKATL GLIETDTPLP PGETRASQDV IRQYEDAEQQ
IPAELQQDAK TGETAKKRSI WSYLTFGLFD
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