| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0948 |
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| Symbol | |
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| ID | 5108806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1070686 |
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| End bp | 1072425 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640502165 |
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| Product | putative sulfate transporter YchM |
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| Protein accession | YP_001186448 |
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| Protein GI | 146305983 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0659] Sulfate permease and related transporters (MFS superfamily) |
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| TIGRFAM ID | [TIGR00815] high affinity sulphate transporter 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.327323 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACGTC CATCGTTACC GCTGTTCGCC GCCTGGCGCC AGACGCTGCG CGCCGGTTAC
TCGTGGAAGG CCCTGCGCGG AGACCTGAGC GCCGGCCTGA CGGTGGGCAT CATCGCCATT
CCGCTGGCCA TGGCGCTGGC CATCGCGGTG GGCGTGGCAC CGCAGCACGG CCTCTATACC
GTGCTGATCG CCGCGCCCCT GATCGCCCTG TGCGGCGGCT CGCGCTTCAA CATCTCCGGC
CCCACCGCCG CCTTCGTAGT GATCCTGCTA CCGATCACCC AGCAATACGG CCTCGGCGGA
TTGCTGCTGT GCACGCTGAT GGCCGGGCTG ATCCTGATCA GCCTGGGCCT GCTGCGCGCC
GGACGCCTGA TCGAATTCGT GCCCTATCCG GTGACCCTGG GCTTTACCGC CGGCATCGGC
ATCGTCATCG CCATCCTGCA GATCAAGGAC CTGTTCGGCC TGCATCTGGC TGGCGCGCCG
CAACACCTAC TGGAGCAGGT GAATCTTCTG GTGCGCGCCC TACCCGGCCT GCAGCCTGGC
GACACGCTGG TTGGCCTCGC CTGCCTGACA ACATTGCTGA TCTGGCCGCG CCTGATGCCA
AAGATCCCTG CGCATCTGGT AGCCCTGGCG GTCGGCGCGC TGCTCGCGCT CGCTCTGGAA
CGCCTGGGGC TGCCGGTGGC GACACTGGGC GAACGCTTCA CCTATCAGCT CGACGGCATC
GAGCATCCCG GCATTCCGCC CTTCCTGCCC AGCCTGGCGT TACCCTGGAG CCTGCCCGGC
GCTGACGGCC AGCCGCTGGT AGTCTCCTTC GAGCTGATTC GCCAACTGCT CGCCCCGGCA
TTCGCCATCG CCATGCTCGG CGCCATCGAG TCACTGCTGT GTGCAGTGGT GGCCGACGGC
ATGACCGGCA GCAAGCACGA CCCCAACGCC GAACTGATCG GCCAGGGCCT GGGCAATCTG
GCCGCGCCCT TCTTCGGCGG CATCACCGCC ACTGCCGCCA TCGCCCGCAC CGCCGCCAAT
GTGCGCGCCG GCGCGTTTTC GCCAGTGGCG GCTCTGGTTC ATGCCGGGGT GGTACTGGCG
GCCATCCTGC TGCTCGCACC GCTGTTCAGC TACCTGCCGA TGGCGGCTCT GGCCGCGCTG
CTGTTGATGG TGGCGTGGAA CATGAGCGAA CCCCACCATG TTGCCCACAC CCTGCGCATC
GCCCCACGCA GCGATGTACT GGTGCTGCTG ACCTGCCTGG TGCTGACGGT GCTGTTCGAT
ATGGTGCTGG CCGTTGGCGT CGGCCTGCTG CTGGCCGCCG GCCTGTTCAT CAAGCGCATG
AGCGAGCTGA CCGATACGGC CGCCCTGAAC CGCCAACAGC GAGAAGCGCT GCAAGACCTG
CCCGAGCACG TACTGGCCTA CGCCATTCGC GGCCCGCTGT TCTTCGGCGC GGCAGAGAAG
GCGCTGAGCG TGCTGCGCCG CTTCACGCCC GGCGTGAAAG TGGTGGTGGT CGATATCAGC
GCCGTGCCGC TGCTGGACAT GACCGCCCTG GCCGCGCTGG ACAACGTGCT GCGCGACTAT
CGCCAGCAGG GCGTGGCGCT GATCCTCAGC GGCCCCACCG CCCAGGTACG CCTGCAACTG
CGGCGAGCCG GCGTGCAGCG CCGCGAAGGC GAGCTGGCAT ATGTGCGGGA TCTGCCGCAG
GCGCGGGAAA AGGCCTTGCG CTGGCTCGAG GCAAGCCCCG ACACGCAGCA CGCCATGTAG
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| Protein sequence | MSRPSLPLFA AWRQTLRAGY SWKALRGDLS AGLTVGIIAI PLAMALAIAV GVAPQHGLYT
VLIAAPLIAL CGGSRFNISG PTAAFVVILL PITQQYGLGG LLLCTLMAGL ILISLGLLRA
GRLIEFVPYP VTLGFTAGIG IVIAILQIKD LFGLHLAGAP QHLLEQVNLL VRALPGLQPG
DTLVGLACLT TLLIWPRLMP KIPAHLVALA VGALLALALE RLGLPVATLG ERFTYQLDGI
EHPGIPPFLP SLALPWSLPG ADGQPLVVSF ELIRQLLAPA FAIAMLGAIE SLLCAVVADG
MTGSKHDPNA ELIGQGLGNL AAPFFGGITA TAAIARTAAN VRAGAFSPVA ALVHAGVVLA
AILLLAPLFS YLPMAALAAL LLMVAWNMSE PHHVAHTLRI APRSDVLVLL TCLVLTVLFD
MVLAVGVGLL LAAGLFIKRM SELTDTAALN RQQREALQDL PEHVLAYAIR GPLFFGAAEK
ALSVLRRFTP GVKVVVVDIS AVPLLDMTAL AALDNVLRDY RQQGVALILS GPTAQVRLQL
RRAGVQRREG ELAYVRDLPQ AREKALRWLE ASPDTQHAM
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