| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0931 |
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| Symbol | secA |
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| ID | 5108789 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1051339 |
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| End bp | 1054158 |
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| Gene Length | 2820 bp |
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| Protein Length | 939 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640502148 |
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| Product | preprotein translocase subunit SecA |
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| Protein accession | YP_001186431 |
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| Protein GI | 146305966 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.667374 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.20776 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCCTT CGCCCGCAGC CATGCTGGCT GCCAGGTCGC GATTTGCGCC GACCTCCATC
CATTCGCCGG AAGATCCTGT CGATATGTTT GCGCCTCTGT TGAAAAAACT TTTCGGAAGC
AAGAATGAGC GTGAAGTCAA ACGCATGCTC AAGGCGGTGC AGTCCGTCAA CGCCCTCGAA
GAGCAGATGA TCGCCCTCTC GGACGAGCAA CTGCGTGGCA AGACCGAAGA GTTCAAGGCC
CGTCTGGCCA AGGGCGAAAC CCTCGATCAG TTACTTGCCG AAGCCTTCGC CGTGGCCCGT
GAGGCCGGCA AGCGCGTGAT GGGCATGCGT CACTTCGACG TGCAGCTGAT CGGTGGCATG
ACCCTGCACG AAGGCAAGAT CGCCGAGATG CGTACCGGTG AGGGCAAGAC CCTCGTCGGT
ACCCTGGCGG TCTACCTCAA CGCACTGTCC GGCAAGGGCG TGCACGTGGT CACCGTCAAC
GAATACCTGG CCCGCCGCGA CGCCAACTGG ATGCGTCCGC TGTATGAATT CCTCGGCCTC
ACCGTGGGCA TCGTCACCCC CTTCCAGCCG CCGGAAGAAA AGCGTGCCGC CTACGCTGCC
GACATCACCT ACGGCACCAA CAACGAGTTC GGTTTCGATT ACCTGCGCGA CAACATGGCG
TTCAGCCTGG AAGACAAGTT CCAGCGCGAA CTGAACTTCG CCGTGATCGA CGAAGTGGAC
TCGATCCTCA TCGACGAAGC CCGTACGCCG CTGATCATCT CCGGCCAGGC CGAGGACAGC
TCCAAGCTGT ACACCGAGAT CAACCGCCTG ATCCCGCGCC TCAAGCAGCA CATCGAGGAA
GAGGAGGGCG TGGTGACCCA GGAAGGTCAC TACAAGGTCG ACGAGAAATC GCGTCAGGTC
GAGCTCAACG AAGCCGGCCA CCAGTACGTC GAGGAGATGC TCACCGCTGC CGGTCTGCTG
GCCGAGGGTG AGAGCCTCTA TTCCGCGCAC AACCTCGGCC TGCTGACTCA CGTCTATGCC
GGCCTGCGCG CCCACACCCT GTTCAACCGC AACGTCGAGT ACATCGTGCA GAACGGCCAG
GTGATCCTGA TCGACGAGCA CACCGGCCGG ACCATGCCGG GGCGTCGCCT GTCCGAGGGC
CTGCACCAGG CCATCGAAGC CAAGGAAGGG GTGAACATCC AGGCCGAGAG CCAGACCCTG
GCCTCGACCA CCTTCCAGAA CTACTTCCGC CTGTACAACA AGCTGTCCGG CATGACCGGT
ACCGCAGATA CCGAGGCCTT CGAGTTCCGT CAGATCTACG GTCTGGACGT GGTGGTGATC
CCCACCAACA AGCCGATCGC GCGTAAGGAC TTCAACGATC TGGTCTACCT GACCCAGGAA
GAGAAGTACC AGGCGATCAT CACCGACATC AAGGACTGCC AGGCCCAGGG CCGGCCGATC
CTGGTCGGTA CCGCCTCGAT CGAGACTTCC GAGTACGTCA GCCAGCTGCT GCAGAAGGAA
AAGATCGAGC ACAAGGTGCT CAACGCCAAG TACCACGACA AGGAAGCCGA GATCATCGCC
CAGGCCGGTC GCCCGGGCGC GGTGACCATC GCCACCAACA TGGCCGGTCG CGGTACCGAC
ATCCTCCTCG GCGGCAACTG GGAAGTGGAA GTCGCTGCGC TGGAGAACCC CACCGACGAG
CAGATCGCGC AGATCAAGAC CGAGTGGCAG AAGCGACACC AGCAGGTGAT CGAGGCCGGC
GGCCTGCACG TGATCGCCTC CGAGCGCCAC GAGTCGCGGC GTATCGACAA CCAGCTGCGT
GGTCGTGCCG GTCGCCAGGG TGACCCGGGT TCCAGCCGCT TCTACCTGTC GCTGGAAGAC
AACCTGATGC GCATCTTCGC CTCGGATCGG GTGAAGAACT TCATGAAGGC CTTGGGCATG
CAGTCCGGCG AGGCCATCGA GCACCGCATG GTCACCAACG CCATCGAGAA GGCCCAGCGC
AAGGTCGAAG GCCGCAACTT CGACATGCGT AAGCAGCTGC TCGAATTCGA CGACGTGGCC
AACGAGCAGC GCAAGGTGAT CTATCACATG CGCAACAGCC TGCTGGCTGC CGAGAACGTC
GGCGACACCA TCGCCGAGTT CCGCGAGGAA GTGCTGACCG CCGCCATCAA CGGCCACATT
CCGCCGCAAT CGATGCCCGA GCAGTGGGAC GTCGCCGGCC TGGAATCCAC CCTACAGAGC
GATTTCGGCC TGAAGCTGCC GATCCAGCAG TGGCTGGACG AAGACGACAA GCTGTACGAG
GAGACCCTGC GCGAGCGCAT CCTCGCCGAG CTGGTGGCGG CCTACAACGA GAAGGAAACC
CAGGCCAGTG CCGAGGCCCT GCGCACCTTC GAGAAGCAGA TTCTGCTGCG CGTGCTGGAC
GATCTGTGGA AAGACCACCT GTCGACCATG GATCACCTGC GTCACGGCAT CCACCTGCGC
GGTTATGCGC AGAAGAACCC CAAGCAGGAA TACAAGCGCG AGTCCTTCGC CCTGTTCCAG
GAGCTGCTGG AGTCGATCAA GCGCGACACC ATTCGCGTGC TCAGCCATGT GCAGGTGCGT
CGTGAAGACC CGGCCGAGGA AGAGGCCCGT CTGCGTCGCG AGGCCGAGGC ACTGGCCGAG
CGCATGCAGT TCCAGCATGC CGAAGCATCG GCGCTGGCAG CCGAACAAGA TGGCGCCGAG
GAAGGCGCAG TCGCCACCGC CACCGCGCCG GTGCGCAGCG AGAACAAGGT CGGCCGCAAC
GAACCCTGCC CTTGCGGCTC GGGCAAGAAG TACAAGCACT GCCACGGTCA GATCAACTGA
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| Protein sequence | MPPSPAAMLA ARSRFAPTSI HSPEDPVDMF APLLKKLFGS KNEREVKRML KAVQSVNALE
EQMIALSDEQ LRGKTEEFKA RLAKGETLDQ LLAEAFAVAR EAGKRVMGMR HFDVQLIGGM
TLHEGKIAEM RTGEGKTLVG TLAVYLNALS GKGVHVVTVN EYLARRDANW MRPLYEFLGL
TVGIVTPFQP PEEKRAAYAA DITYGTNNEF GFDYLRDNMA FSLEDKFQRE LNFAVIDEVD
SILIDEARTP LIISGQAEDS SKLYTEINRL IPRLKQHIEE EEGVVTQEGH YKVDEKSRQV
ELNEAGHQYV EEMLTAAGLL AEGESLYSAH NLGLLTHVYA GLRAHTLFNR NVEYIVQNGQ
VILIDEHTGR TMPGRRLSEG LHQAIEAKEG VNIQAESQTL ASTTFQNYFR LYNKLSGMTG
TADTEAFEFR QIYGLDVVVI PTNKPIARKD FNDLVYLTQE EKYQAIITDI KDCQAQGRPI
LVGTASIETS EYVSQLLQKE KIEHKVLNAK YHDKEAEIIA QAGRPGAVTI ATNMAGRGTD
ILLGGNWEVE VAALENPTDE QIAQIKTEWQ KRHQQVIEAG GLHVIASERH ESRRIDNQLR
GRAGRQGDPG SSRFYLSLED NLMRIFASDR VKNFMKALGM QSGEAIEHRM VTNAIEKAQR
KVEGRNFDMR KQLLEFDDVA NEQRKVIYHM RNSLLAAENV GDTIAEFREE VLTAAINGHI
PPQSMPEQWD VAGLESTLQS DFGLKLPIQQ WLDEDDKLYE ETLRERILAE LVAAYNEKET
QASAEALRTF EKQILLRVLD DLWKDHLSTM DHLRHGIHLR GYAQKNPKQE YKRESFALFQ
ELLESIKRDT IRVLSHVQVR REDPAEEEAR LRREAEALAE RMQFQHAEAS ALAAEQDGAE
EGAVATATAP VRSENKVGRN EPCPCGSGKK YKHCHGQIN
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