Gene Pmen_0927 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0927 
Symbol 
ID5108785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1047379 
End bp1048572 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content65% 
IMG OID640502144 
Productcell division protein FtsZ 
Protein accessionYP_001186427 
Protein GI146305962 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0206] Cell division GTPase 
TIGRFAM ID[TIGR00065] cell division protein FtsZ 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000829839 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.686673 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGAAC TAGTAGATAA CATTCCGCAA AGCGCGGTGA TCAAAGTGAT CGGTGTCGGT 
GGTGGCGGCG GCAACGCAGT CAATCACATG GCGGTCAGCA ACATCGAAGG CGTCGAGTTC
ATCTGCGCCA ACACCGATGC GCAGGCGCTG AAGAACATCG GTGCGCGCAC CGTGCTGCAG
CTCGGCCCGG GCGTGACCAA GGGCCTGGGC GCTGGCGCCA ATCCGGAAGT CGGTCGTCAG
GCCGCGCTGG AAGATCGCGA GCGCATCGCC GAAGTACTGG CGGGCACCGA CATGGTGTTC
ATCACCACCG GCATGGGCGG TGGCACCGGT ACCGGCGCCG CGCCGGTAAT CGCCGAGGTG
GCCAAGGAGC TGGGCATCCT CACCGTTGCG GTGGTGACCC GTCCGTTCCC GTTCGAAGGC
CGCAAGCGCA TGCAGATCGC CGACGAAGGG ATCCGCGCAC TGGCCGAGAG CGTCGACTCG
CTGATCACCA TCCCCAACGA GAAGCTGCTG ACCATCCTGG GCAAGGATGC CAGCCTGCTG
TCCGCCTTCG CCAAGGCCGA TGACGTGCTG GCCGGCGCGG TGCGTGGCAT TTCCGACATC
ATCAAGCGTC CGGGCATGAT CAACGTCGAC TTCGCCGACG TGAAGACCGT GATGAGCGAG
ATGGGCATGG CCATGATGGG CACCGGCTGC GCCAGCGGTC CGAACCGTGC TCGCGAGGCC
ACCGAAGCCG CTATCCGCAA CCCGCTGCTG GAAGACGTCA ACCTGCAGGG CGCGCGCGGC
ATCCTGGTGA ACATCACCGC CGGCCCGGAT CTGTCCCTGG GCGAGTACTC CGACGTGGGT
AACATCATCG AGCAGTTCGC TTCCGAGCAC GCCACCGTCA AGGTCGGTAC CGTGATCGAC
GCCGACATGC GCGACGAGCT GCACGTCACC GTGGTCGCCA CCGGCCTCGG CGCGCGCATG
GAGAAACCGG TCAAGGTGAT CGACAACACC GTGCAGGTTG CCGCCAGCCA GCCGGTTGCC
CAGCAGCCCG CCGCGCAGCC GCGCAGCGAG CAGTCGGTCA ACTACAAGGA CTACGAGCGT
CCGACCGTAC AGCGCCAGAG CCACAGCGGC GCGGCCACTG CAGCCAAGCT CAATACCCAG
GACGATCTGG ACTACCTGGA TATTCCGGCT TTCCTGCGTC GCCAGGCTGA TTGA
 
Protein sequence
MFELVDNIPQ SAVIKVIGVG GGGGNAVNHM AVSNIEGVEF ICANTDAQAL KNIGARTVLQ 
LGPGVTKGLG AGANPEVGRQ AALEDRERIA EVLAGTDMVF ITTGMGGGTG TGAAPVIAEV
AKELGILTVA VVTRPFPFEG RKRMQIADEG IRALAESVDS LITIPNEKLL TILGKDASLL
SAFAKADDVL AGAVRGISDI IKRPGMINVD FADVKTVMSE MGMAMMGTGC ASGPNRAREA
TEAAIRNPLL EDVNLQGARG ILVNITAGPD LSLGEYSDVG NIIEQFASEH ATVKVGTVID
ADMRDELHVT VVATGLGARM EKPVKVIDNT VQVAASQPVA QQPAAQPRSE QSVNYKDYER
PTVQRQSHSG AATAAKLNTQ DDLDYLDIPA FLRRQAD