Gene Pmen_0890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0890 
Symbol 
ID5108748 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1009404 
End bp1010321 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content61% 
IMG OID640502106 
Productsulfate adenylyltransferase subunit 2 
Protein accessionYP_001186390 
Protein GI146305925 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0175] 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes 
TIGRFAM ID[TIGR02039] sulfate adenylyltransferase, small subunit 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGATA AACTGACCCA CCTGAAGCAG CTGGAGGCGG AGAGTATCCA CATCATTCGT 
GAAGTGGCCG CCGAATTCGA CAACCCGGTG ATGCTCTATT CCATCGGTAA GGACTCCGCC
GTGATGCTGC ATCTGGCACG CAAGGCGTTC TTCCCTGGCA AGCTGCCGTT CCCGGTCCTG
CACGTCGATA CCCGCTGGAA GTTCCAGGAA ATGTACCGCT TCCGCGAAAA GATGGTCAGC
GAGATGGGCC TGGAGCTGAT CACCCACATC AACCCCGATG GTGTGGCGCA GGACATGAAC
CCCTTCACCT ACGGCAGTGC CAAGCACACC GACGTGATGA AGACCGAGGG CCTCAAGCAG
GCGCTGGACA AGTACGGCTT CGACGCCGCC TTCGGTGGCG CGCGCCGCGA CGAGGAGAAA
TCCCGCGCCA AGGAGCGCGT GTACTCCTTC CGCGACAGCA AGCACCGCTG GGACCCGAAG
AACCAGCGCC CCGAGCTGTG GAACGTGTAC AACGGCAAGG TCAAGAAGGG CGAGTCGATC
CGCGTCTTCC CGCTGTCGAA CTGGACCGAG CTGGACATCT GGCAATATAT CTACCTGGAG
CAGATCCCGA TCGTGCCGCT GTACTTCGCC GCCGAGCGCG AAGTGGTGGA GCTCAACGGC
ACGCTGGTGA TGATCGATGA CGAGCGCATC CTCAACTACC TGACGCCCGA GCAGAAGGCC
AGCATCCACA AGAAGATGGT GCGCTTCCGT ACCCTGGGCT GCTACCCGCT GACCGGCGCG
GTGGAGTCCA CCGCGGCGAC CCTGCCGGAC ATCATCCAGG AAATGCTCCT GACCAAGACC
AGCGAACGCC AGGGCCGGGT CATCGACCAC GACGCCGCCG GTTCGATGGA AGAAAAGAAA
CGCCAGGGCT ACTTCTAA
 
Protein sequence
MLDKLTHLKQ LEAESIHIIR EVAAEFDNPV MLYSIGKDSA VMLHLARKAF FPGKLPFPVL 
HVDTRWKFQE MYRFREKMVS EMGLELITHI NPDGVAQDMN PFTYGSAKHT DVMKTEGLKQ
ALDKYGFDAA FGGARRDEEK SRAKERVYSF RDSKHRWDPK NQRPELWNVY NGKVKKGESI
RVFPLSNWTE LDIWQYIYLE QIPIVPLYFA AEREVVELNG TLVMIDDERI LNYLTPEQKA
SIHKKMVRFR TLGCYPLTGA VESTAATLPD IIQEMLLTKT SERQGRVIDH DAAGSMEEKK
RQGYF