Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_0885 |
Symbol | |
ID | 5108743 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 1003239 |
End bp | 1004291 |
Gene Length | 1053 bp |
Protein Length | 350 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640502101 |
Product | histidinol-phosphate aminotransferase |
Protein accession | YP_001186385 |
Protein GI | 146305920 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase |
TIGRFAM ID | [TIGR01141] histidinol-phosphate aminotransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.224809 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCAAGT TCTGGAGCCC CTTCGTCAAG GACCTGGTGC CCTATGTGCC GGGTGAGCAG CCCAAGCTGA GCAAGCTGGT CAAGCTCAAT ACCAACGAGA ACCCCTACGG CCCGTCGCCC AAGGCCATCG CGGCGATGCA GGCCGAGCTG AACGACGACC TGCGCCTGTA CCCGGACCCC AACGGCGACC GGCTGAAACA GGCCGTGGCT GACTACTACG GCGTGAGCAC GGCGCAGGTG TTCGTCGGCA ACGGCTCCGA CGAGGTGCTG GCGCACGCCT TCCATGGCCT GTTCCAGCAT GACAAGCCGC TGCTGTTCCC GGATGTCACC TACAGCTTCT ACCCGGTCTA CTGCGGCCTG TATGGCATCG AGTTCGAGGC GCTGGCGCTG GACGAAAATT TCCAGATCCG CGTCGAGGAC TATGCCCGGC CCAACGCCGG CATCATCTTC CCCAACCCCA ACGCGCCGAC CGGCTGCCTG CTGCCGCTCG AGACCGTCGA GCGTCTGCTG CAGGGCAGCC CGGACTCGGT GGTGCTGGTG GACGAGGCTT ATATCGATTT CGGTGGCGAT ACCGCCATCA GCCTGGTGGA CAAATACCCC AATCTGCTGG TCACCCAGAC CCTGTCCAAA TCGCGTTCGC TGGCCGGTCT GCGCGTCGGT ATCGCGGTTG GTCACCCGGA CCTGATCGAG GCGCTGGAGC GGATCAAGAA CAGCTTCAAC TCCTATCCGC TCGATCGCAT GGCCATCGCC GGCGCAGCGG CGGCGTTCGC CGATCGCGAG TACTTCGAGC GGACCTGCCG ACAGGTGATC GCCAGCCGCG AGGCGGTGGT CGCCGGGTTG CAGGGGCTGG GCTTCGAGGT GCTGCCGTCG GCCGCCAACT TCGTCTTCGC CCGTCACTCG GACAAGGATG CCGCCACTCT GGCGGCCGGT CTGCGCGAGC AGGGCGTGAT CGTGCGCCAC TTCAAGCAGC CGCGCATCGC CCAGTTCCTG CGTATCACCA TCGGCACGCC GGAGCAGAAC CAGGCCCTGC TGGACGCCCT GCAAGGTCTT TGA
|
Protein sequence | MSKFWSPFVK DLVPYVPGEQ PKLSKLVKLN TNENPYGPSP KAIAAMQAEL NDDLRLYPDP NGDRLKQAVA DYYGVSTAQV FVGNGSDEVL AHAFHGLFQH DKPLLFPDVT YSFYPVYCGL YGIEFEALAL DENFQIRVED YARPNAGIIF PNPNAPTGCL LPLETVERLL QGSPDSVVLV DEAYIDFGGD TAISLVDKYP NLLVTQTLSK SRSLAGLRVG IAVGHPDLIE ALERIKNSFN SYPLDRMAIA GAAAAFADRE YFERTCRQVI ASREAVVAGL QGLGFEVLPS AANFVFARHS DKDAATLAAG LREQGVIVRH FKQPRIAQFL RITIGTPEQN QALLDALQGL
|
| |