Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_0875 |
Symbol | |
ID | 5108969 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 995081 |
End bp | 996055 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640502091 |
Product | KpsF/GutQ family protein |
Protein accession | YP_001186375 |
Protein GI | 146305910 |
COG category | [K] Transcription [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0794] Predicted sugar phosphate isomerase involved in capsule formation [COG2524] Predicted transcriptional regulator, contains C-terminal CBS domains |
TIGRFAM ID | [TIGR00393] KpsF/GutQ family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCAGA CCCGCGACCT GATTGATTCC GCACAGCGTA CCATCCGCCT CGAACTCGAA GCGGTGCAGG AACTGCTGCC TCGCATCGAC GCCAACTTCA TCAAGGCCTG CGAACTGATT CTGGCCTGCA AGGGCCGCGT CGTGGTGGTC GGCATGGGTA AATCCGGACA CATCGGCAAC AAGATCGCTG CCACCCTGGC CAGCACCGGC ACCACGTCCT TCTTCGTCCA CCCGGCAGAA GCCAGCCATG GCGACATGGG CATGATCACC AAGGACGATA TCGTTCTGGC CCTGTCCAAC TCCGGCAGCA CCGCGGAAAT CGTCACCCTG CTGCCGCTGA TCAAGCGTCT CGGCATCCGT CTGATCAGCA TGACCGGCAA CCCGGACTCG CCCCTGGCCA AGGCCGCCGA GGTCAATCTC GATGCCCGCG TGTCGCAGGA AGCCTGCCCG CTGAACCTGG CGCCGACCTC CTCGACCACC GCCAGCCTGG TGCTGGGCGA CGCCCTGGCC ATCGCCTTGC TGGAAGCGCG CGGTTTCACC GCGGAAGACT TCGCCTTCTC CCATCCCGGT GGCGCCCTCG GCCGCCGCCT GCTGCTCAAG GTGGAAAACG TCATGCACGC AGGCGACGCC CTGCCGCGGG TGAATCGCGG CACCAGCCTG CGCGATGCGC TGCTGGAGAT GACCCAGAAG GGCCTGGGCA TGACCGTGGT GCTGGAAGCC GACGGCCGCC TCGCCGGCAT CTTCACCGAC GGCGATCTGC GCCGCACCCT GGACAAGGGC ATCGACGTGC GCCAGGCCTC GATCGACGAG GTGATGACGC CGCACGGCAA GACCGCCCGC GCCGAAATGC TCGCCGCCGA GGCCCTGAAG ATCATGGAAG ACCACAAGAT CAATGCACTG GTGGTGGTGG ACGACCAGGA TCGACCGGTC GGCGCGCTGA ACATGCACGA TCTGCTGCGC GCGGGAGTAA TGTGA
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Protein sequence | MNQTRDLIDS AQRTIRLELE AVQELLPRID ANFIKACELI LACKGRVVVV GMGKSGHIGN KIAATLASTG TTSFFVHPAE ASHGDMGMIT KDDIVLALSN SGSTAEIVTL LPLIKRLGIR LISMTGNPDS PLAKAAEVNL DARVSQEACP LNLAPTSSTT ASLVLGDALA IALLEARGFT AEDFAFSHPG GALGRRLLLK VENVMHAGDA LPRVNRGTSL RDALLEMTQK GLGMTVVLEA DGRLAGIFTD GDLRRTLDKG IDVRQASIDE VMTPHGKTAR AEMLAAEALK IMEDHKINAL VVVDDQDRPV GALNMHDLLR AGVM
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