| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0869 |
|---|
| Symbol | |
|---|
| ID | 5108963 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | - |
|---|
| Start bp | 990691 |
|---|
| End bp | 990999 |
|---|
| Gene Length | 309 bp |
|---|
| Protein Length | 102 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640502085 |
|---|
| Product | SSU ribosomal protein S30P / sigma 54 modulation protein |
|---|
| Protein accession | YP_001186369 |
|---|
| Protein GI | 146305904 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1544] Ribosome-associated protein Y (PSrp-1) |
|---|
| TIGRFAM ID | [TIGR00741] ribosomal subunit interface protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.0769491 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 0.979804 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGTCA ACATCAGTGG ACATCAGCTG GATGTGACCG ACGCCCTGCG TGACTATATC
GGCGAGAAAC TGGGCCGACT GGAACGCCAC TTCGACAAGA TCACCAACGT TCAGGTGACC
ATGGAGGTCG AGAAACTCAA GCAGAAGATC GAAGCCACCC TGCACGTCGC CGGCGGCGAA
GTCGTCGCCA ACGCAGAACA CCAGGACATG TACGCAGCCA TCGACCTGCT GGCCGACAAA
CTCGACCGTC AACTCATCAA GCACAAGGAA AAGCAGCTCG AACGCCTGCA AGGCGCCACG
GCCCGCTGA
|
|---|
| Protein sequence | MQVNISGHQL DVTDALRDYI GEKLGRLERH FDKITNVQVT MEVEKLKQKI EATLHVAGGE
VVANAEHQDM YAAIDLLADK LDRQLIKHKE KQLERLQGAT AR
|
|---|
| |