Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_0855 |
Symbol | gatC |
ID | 5108949 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 975402 |
End bp | 975689 |
Gene Length | 288 bp |
Protein Length | 95 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640502071 |
Product | aspartyl/glutamyl-tRNA amidotransferase subunit C |
Protein accession | YP_001186355 |
Protein GI | 146305890 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0721] Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit |
TIGRFAM ID | [TIGR00135] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGCTTG AACGCTCCGA GGTGGAAAAA ATCGCCCACC TGGCCCGCCT TGGCCTGAAC GAAAGCGATA TTCCGCAAAC CACCGAAACC CTGAACAGCA TCCTCGGCCT GATCGACCAG ATGCAGGCGG TCGACACCCA GGGCATCGAG CCCCTGGCCC ACCCTCTGGA AGCCACCCAG CGCCTGCGCG CCGACGTGGT CAGCGAGCAC AACCAGCGCG ACGCCTATCA GGCCATCGCC CCGGCCGTGG AAAGCGGCCT GTACCTCGTG CCGAAAGTCA TCGAATAA
|
Protein sequence | MALERSEVEK IAHLARLGLN ESDIPQTTET LNSILGLIDQ MQAVDTQGIE PLAHPLEATQ RLRADVVSEH NQRDAYQAIA PAVESGLYLV PKVIE
|
| |