| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0853 |
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| Symbol | gatB |
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| ID | 5108947 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 972478 |
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| End bp | 973923 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640502069 |
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| Product | aspartyl/glutamyl-tRNA amidotransferase subunit B |
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| Protein accession | YP_001186353 |
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| Protein GI | 146305888 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
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| TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATGGG AAACCGTAAT CGGGCTCGAG ATCCACGCTC AGCTCAGCAC GCAATCGAAG
ATCTTCTCGG CCAGCGCCAC CAGCTTCGGC GCCGAGCCCA ACACCCAGGC CAGCCTGATC
GACCTCGGCA TGCCCGGCAC CCTGCCGGTG CTCAACGCCG AGGCGGTGCG CATGGCGGTG
AAATTCGGCC TGGCGATCGA CGCGCACATC GCGCCGCAGA ACGTCTTCGC CCGTAAGAAC
TACTTCTATC CGGACCTGCC CAAGGGCTAC CAGACCAGCC AGATGGATCA CCCCATCGTC
GGCAAGGGCC ATCTGGACAT CACCCTGGAA GACGGCACCG TCAAGCGCAT CGGCATCACC
CGCGCGCACC TGGAAGAGGA CGCCGGCAAG AGCCTGCACG AAGACTTCCA CGGCATGAGC
GGCATCGACC TCAACCGCGC CGGTACGCCG CTGCTGGAGA TCGTTTCCGA GCCGGACATC
CGTTCGGCCA AGGAAGCCGT GGCCTATGTG AAGGCCATCC ACGCCCTGGT GCGTTATCTC
GGCATCTGTG ACGGCAACAT GGCCGAGGGC TCGCTGCGCT GCGACTGCAA CGTTTCCGTG
CGCCCGAAAG GCCAGGAAGC CTTCGGCACC CGCGCCGAGA TCAAGAACGT CAACTCCTTC
CGCTTTATCG AGAAGGCGAT CAACCACGAG ATCCAGCGCC AGATCGAGCT GATCGAGGAC
GGCGGCAAGG TCATACAGGA AACCCGCCTG TACGACCCGA ACAAGGATGA GACCCGCTCC
ATGCGCGGCA AGGAAGAAGC CAACGACTAC CGTTACTTCC CCTGCCCCGA TCTGCTGCCG
GTGGTGATCG AGCAGAGCTT CCTCGACGAA GTGCGTAGCC AGCTGCCGGA GCTGCCGACG
CAGAAGCGCG AGCGCTTCCA GAGCCAGTAC GGTCTGTCCA CCTACGACGC CAGCGTGCTC
TCGGCCAGCC GCGAGATGGC CGAGTACTTC GAAGAAGTGG CCAAGGTCTG CGGCGATGCC
AAGCTGGCGG CCAACTGGGT GATGGGCGAG CTGTCCAGCC TGCTCAACAA GGAAGGTCTG
GAGATCGAGC AGTCGCCGGT TTCCGCCGAG CACCTGGGCG GCATGATCCT GCGCATCAAG
GACAACACCA TCAGCGGCAA GATCGCCAAG ATGGTGTTCG AAGCCATGGC CGCCGGTGAA
GGCAGCGCCG ATGCGATCAT CGAGAGCAAG GGCCTCAAGC AGGTCACCGA CAGCGGCGCC
ATCGAGGCGA TGCTCGACGA GGTGCTGGCC GCCAACGCCG AGCAGGTCGA GCAGTACCGC
GCCAGCGACG AAGCCAAGCG CGGCAAGATG TTCGGCTTCT TCGTCGGCCA GGCCATGAAA
GCCTCCAAGG GCAAGGCCAA CCCGGGGCAA GTGAACGAAC TGCTGAAGAA GAAGCTCGAA
GGCTGA
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| Protein sequence | MQWETVIGLE IHAQLSTQSK IFSASATSFG AEPNTQASLI DLGMPGTLPV LNAEAVRMAV
KFGLAIDAHI APQNVFARKN YFYPDLPKGY QTSQMDHPIV GKGHLDITLE DGTVKRIGIT
RAHLEEDAGK SLHEDFHGMS GIDLNRAGTP LLEIVSEPDI RSAKEAVAYV KAIHALVRYL
GICDGNMAEG SLRCDCNVSV RPKGQEAFGT RAEIKNVNSF RFIEKAINHE IQRQIELIED
GGKVIQETRL YDPNKDETRS MRGKEEANDY RYFPCPDLLP VVIEQSFLDE VRSQLPELPT
QKRERFQSQY GLSTYDASVL SASREMAEYF EEVAKVCGDA KLAANWVMGE LSSLLNKEGL
EIEQSPVSAE HLGGMILRIK DNTISGKIAK MVFEAMAAGE GSADAIIESK GLKQVTDSGA
IEAMLDEVLA ANAEQVEQYR ASDEAKRGKM FGFFVGQAMK ASKGKANPGQ VNELLKKKLE
G
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