| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0841 |
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| Symbol | |
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| ID | 5108935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 959223 |
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| End bp | 960818 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640502057 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001186341 |
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| Protein GI | 146305876 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.960995 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTATGT CTCCCCTGTG CAAGGCCCTG CTTACCGCAG GCCTGCTCAC CAGTGCTTCG
TTCGCCCACG CCAGCAATCT GGTGTATTGC TCCGAAGGCA GCCCGGGTGG TTTCGACCCC
GGCCAGTACA CCACCGGCAC CGACTTCGAC GCGGCCTCGG AAACCATCTT CAACCGCCTC
GCCGAATTCG AACGCGGCGG CACCAAGGCC CAACCGGCCC TCGCCACCTC CTGGGACGTC
AGCGAAGATG GTCTGACCTA CACCTTCCAT CTGCGCGAAG GGGTCAAGTT CCACACCACC
GACTACTTCA AGCCGACTCG CGACTTCAAT GCCGACGATG TGCTGTTCAC CTATCAGCGC
ATGCTCGATC GCAACCACCC GTTCCGCCAG GCCTACCCCA GCGAGTTTCC CTACTTCACC
GACATGGGGC TGGACAAGAA CATCGCCAAG GTCGAGAAGA CCGACGACAT GACCGTGGTC
TTCACCCTCA ACGCCGTCGA CGCCGCCTTC GTGCAGAACC TGGCGATGAA CTTTGCCGCG
ATCCACTCGG CCGAATACGC CGACCAGCTG CTCAAGGCCG GCAAGGCCGC GGAGATCAAC
CAGAAGCCCG TCGGCACCGG CCCCTTCGTG TTCAGCCGCT ACCAGAAGGA CGCGGTGATC
CGCTTCAAGG GCAACACCCA GTACTGGGCG CCCGAGCAGG TGAAGATCGA CAACCTGATC
TTCTCCATCA ACACCGACGC CTCGGTGCGC GCCCAGAAGC TGCGCGCCGG CGAATGCCAC
GTCACCCTCA ACCCGCGCCC TGCCGACCTG CAGAGCCTGC AGGCCGACAA GAACCTCAAC
GTACCGACCG AGCCGGGTTA CAACCTCGGC TACATCGCCT ACAACGTCAC CCGCGCCCCC
TTCGACAAGC GCGAAGTCCG TCAGGCGCTG GACATGGCCG TGAACAAGGC AGCCATCATC
GACGCCGTGT ACCAGGGTGC CGGCCAGCTG GCGGTGAACG GCATGCCACC GACCCAGTGG
TCCTATGACG AGTCGATCAA GGATGCCGCC TACGATCCGG AAAAAGCCAA GGAACTGCTC
AAGGCCGCCG GCGTCAAGGA AGGCACCGAG ATCACCCTGT GGGCCATGCC CGTACAGCGC
CCCTACAACC CCAATGCGCG GCTGATGGCC GAGATGCTGC AGAACGACTG GGCCAAGATC
GGCATCAAGG CGCGCATCGT CAGCTACGAA TGGGGCGAGT ACATCAAGCG CGCCCATGCC
GGTGAACACG ACGCCATGCT GATCGGCTGG ACCGGCGACA ACGGCGACCC GGACAACTGG
CTCGGCACCC TGTACGGCTG CGCCTCGGTA GACGGCAACA ACTTCTCCAA GTGGTGCGAC
GCCGAATACG ACAAGCTGGT GGTCGCCGCC AAGCGCGTGA CCGAACAGGA GCAACGCAGC
GAGCTGTATC GTCAGGCGCA GGCGGTTCTC AAGCGCGAGG TGCCGATCAC GCCGATCGCT
CACTCCACGG TCTACCAACC GATGCGCAGC AGCGTCAAAG GCTTCGAGAT CAGTCCCTTC
GGGCGCAACA GCTTCAGCGG TGTCAGCAAC AACTGA
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| Protein sequence | MRMSPLCKAL LTAGLLTSAS FAHASNLVYC SEGSPGGFDP GQYTTGTDFD AASETIFNRL
AEFERGGTKA QPALATSWDV SEDGLTYTFH LREGVKFHTT DYFKPTRDFN ADDVLFTYQR
MLDRNHPFRQ AYPSEFPYFT DMGLDKNIAK VEKTDDMTVV FTLNAVDAAF VQNLAMNFAA
IHSAEYADQL LKAGKAAEIN QKPVGTGPFV FSRYQKDAVI RFKGNTQYWA PEQVKIDNLI
FSINTDASVR AQKLRAGECH VTLNPRPADL QSLQADKNLN VPTEPGYNLG YIAYNVTRAP
FDKREVRQAL DMAVNKAAII DAVYQGAGQL AVNGMPPTQW SYDESIKDAA YDPEKAKELL
KAAGVKEGTE ITLWAMPVQR PYNPNARLMA EMLQNDWAKI GIKARIVSYE WGEYIKRAHA
GEHDAMLIGW TGDNGDPDNW LGTLYGCASV DGNNFSKWCD AEYDKLVVAA KRVTEQEQRS
ELYRQAQAVL KREVPITPIA HSTVYQPMRS SVKGFEISPF GRNSFSGVSN N
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