| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0835 |
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| Symbol | |
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| ID | 5108929 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 950161 |
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| End bp | 953658 |
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| Gene Length | 3498 bp |
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| Protein Length | 1165 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640502051 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_001186335 |
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| Protein GI | 146305870 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGCGAT TGATTGGCTG GGTACTGGTG CTGCTGTGCT GCAGTGCACT GCTACCGGCA
TGGGCATTGC CGCTGAGCAA GGCGGAGCAG GCCTGGCTGG CGCAGCATCC GCGCTTGCTG
GTGGGGGTGG AGCGTACCGG CTGGCCGCCC TTCGACATGG TGGAAAACGG TCGTTACCAG
GGCATCAGCG CCGACTACCT GCGCCTGCTC GGCGAGCGCC TCGGCGTGCA GGTCGACGCG
GTGTACTACG ACGACTGGGA GCAGGCCCTG GCGGCGCTGC GCAAGGGGGA GATCGATATC
CTGCCCTCGG TGGCGCGCAC CCCGGAGCGC GAAAGCTGGA TGCGTTTCAG CGACCCCTAC
CTGATCAGCA GCAGCCTGAT CTTCAGTCGT CCCGAGGTGC AGATCCAGCG GGTCGCCGAC
CTGGCCGGCA AGCGTGTGGC CATCGAGCGT GGCTACGTCC TGCAGCAGCG GTTGCGCGAT
GAAGTGCCCG ACGTGCTGCT GATCGAGGCG CTAAATACCG AGGAGGCCCT GCGTGCGGTG
TCCTCGGGGC GTGCCGACGC CTACCTCGGC GACATGATAG TGGCCAGCTA CCTGATCCGC
CGGCACAACC TGACCAACCT GGAGCTGCGC GGCGAATCGG GGCTCAGCAG CAGCGAGATC
CGCTTCGGCG TGCGCCGCGA CCTGCCACAG CTGGTGGAGC TGCTCGACCG CGCCCTGGCC
AGCCTGAGTG GCGAAGAGCG TGAGACCATC CGGGTGCGCT GGTTGCCGCC GCTCACCGAG
TTCAACTGGC GCAAGGCCCT GCAGGTAGGC TGGCCTTACG TGCTGGGGCT GTTCGTGCTG
ATCGTCTTCG TGCTGATCTG GAATCGCCGC CTGACCGTGC AGATCGCCGA ACGTCAGCGC
GCCGAAGCCG AGGCCAGGCG TCAGCGCAGT ACCCTGCTGG CGCTGATCAA CGCGATACCC
GATCCGATCT GGTTCAAGGA CTGCGACGGC GTCTACCGTG GCTGCAACCC GGCGTTCGCG
GCAATCTTCG GGCGCAGCCC GGAGACGGTG GTCGGTTGCC GCGACGAGCA GCTATTCGAT
GCCGAGCTGA GCCGCGAGCG TGCCGGCCTC GACCGCCGTG CCCTGACCAG CCGCATGCCG
CTGGAGACCG AGACCTGGCT GACCCATGCC GACGGCCGCC GGGTGTTCTA CGACACCCTG
CGTGCGGCCT TCTACGACGA CCGCGGGCAG CTGCTCGGGC TGGTCGGTAC CGGCCGCGAC
ATCACCGTGC GCAAGGAGGT GGAGGACGCC ATGGCGCGGG CCAAGGCGCT GGCCGAACAG
GCGGCGCAGG CCAAGGCCGA CTTCCTCGCC AACATGAGCC ACGAAATCCG CACGCCGATG
AACGCCATCA TCGGCATGTC GCACCTGGCC CTGAAGACCG ATCTCGATCC CCGCCAGCGC
GATTACCTGA ACAAGATCCA GCAGGCCGGT CAGCACCTGC TGGGGGTGAT CAACGACATC
CTCGACTTCT CCAAGATCGA AGCCGGCAAG GTGCGCGTCG AGTGCATCGA GTTCGACCTC
GAGCAGGTGC TCGACAACCT GGCCAACCTG ATCGGCGACA AGGCTGCCGG CAAGGGATTG
GAGTTGCTGT TCAGGCGCGA TGCGCAGGTG CCCTGCGTCC TGCTCGGCGA TCCGCTGCGG
CTCGGTCAGA TCCTGATCAA CTACGCCAAC AACGCGGTCA AGTTCACCGA GCACGGCGAG
GTCGAGGTGT CCATCGAGCT GGAGAAGCGC GACGGCAAGC AGGTCTGGCT GCTGTTCTCG
GTGCGCGATA CCGGCATCGG CCTGAGCCCG GCGCAGCAGG CGCGGCTGTT CGAATCCTTC
CAGCAGGCGG ACAGCTCCAC CACCCGCCGA TACGGCGGCA CCGGACTGGG CCTGGCCATC
TGCAAGCGGC TGGCCGAGGC CATGGGGGGC GAGGTGGGGG TGGACAGTGA GCTTGGCCGT
GGCAGCCGCT TCTGGTGCCG CCTGCCGTTC GCCCTGGGCG ACCGCCAGCG TGCGGCGCTG
CAGCCGCAGG CCGATCTGCG CGGCCGACGC GTGCTGGTGG TCGATGACAA TGCCAACGCC
CGCCTGGTGC TCAGCGAGAT GCTGCGTGGC ATGACCTTCC GTGTCAGCGA GGCGGCCGAC
GGCCTCCAGG CGCTGGCGCT GCTGGAGCAG GCCCAGGCGG CGGGCGATGC CTTCGAACTG
CTGTTCATTG ACTGGCAGAT GCCCGGTATC GACGGGCTGG AGCTGGCGCG GCGGGTACGC
GCACTGGCGC TGTCTCCGCA GCCCAAGGTG CTGATGGTCA GCGCCCATGG CCGCGAGGAT
CTGCTGCAGG GCGCACGGCG CATGGGGGTC GAGGACGTGC TGCTGAAACC GCTCAACCCC
TCGCTGCTGT TCGATGTGGC GATGCGCTGC CTGGATGGCC GCGCCGACAG CGGTCACGCA
CACGGCGCCG CCGGCACCGG CATACCGGAT TTCGCCGGGC GCCGCGTGCT GCTGGTGGAA
GACAACGCGT TGAACCAGGA GGTGGCCAGT GCCCTGCTGC AGGAGGCCGG CCTGCAGGTG
GACGTGGCCG GCAACGGGCA GCAGGCCATC GCGCGGCTGC AGGCTGCGGC GGACGACCAT
TACCAGCTGG TGCTGATGGA CATGCAGATG CCGGTGCTCG ATGGCCTGGC CGCGACCCGT
CTGCTGCGCG CCCAGGCGCG CTTCGCCGCG CTGCCCATCG TGGCCATGAC CGCCAACGCC
CTGGCCGACG ATCGTCAGGC CTGTCTCGCG GCCGGCATGA ACGATCATCT GAGCAAGCCC
ATCGAACCGA CGGCCCTGTG GAGCACTCTG ATGCGTTGGC TGCCGGACGT GGACAGCGGC
CTGCGGCAGG CGCAGGAGGC GGTGGAGCTG GACCTGCAGC TGCCCGGAGT CGACGTGGCC
GCTGGCTTGC GTCGGGTACT GGGCAAGCGC GAGCTGTACC TGGAGCTGCT CGGCAAGTTC
GCCAGCGTGC AGGCCGATTT TCCGGCACAG CTGCGCGGTG CCCTTGCCGA TGGCGACAAC
GCCCGTGGCG AGCGCCTGGC TCATACCTTT AAGGGGTTGG CCGGCAGCAT CGGTGCCAGC
GCCCTGCAGG CGCAGGCGGC CGAACTGGAA CGTGCGCTCG CCAGCGGCAG CGATGCGTTC
GAGGCGCTGC TGGCCGAGCT GGAGCGGCAA CTGCAACCGC TGCTCGCGGC CATTGCCATG
CGCCTGCCGC AGGCACCGAG CAGCGCGGCG GAGGGCTTCG ATCAGGAGCG CTTGCGAACC
GTCTGCCGTC AGCTCGCGCA CCTGCTCGAC GACGACGATC CGCGCAGCGG AAAACTGCTG
GCCGAGCAGG GCGAAATGCT GCAGAGCGCC TTTAATGAGG GGTATGCAGC CATCGCCCGT
GCGGTACAGG GCTACGACTT CGAGCGGGCG CTGCAGGTGC TGCGCGAGGC CGCGGCGCAA
CGAGGCATAG AGTGCTAA
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| Protein sequence | MRRLIGWVLV LLCCSALLPA WALPLSKAEQ AWLAQHPRLL VGVERTGWPP FDMVENGRYQ
GISADYLRLL GERLGVQVDA VYYDDWEQAL AALRKGEIDI LPSVARTPER ESWMRFSDPY
LISSSLIFSR PEVQIQRVAD LAGKRVAIER GYVLQQRLRD EVPDVLLIEA LNTEEALRAV
SSGRADAYLG DMIVASYLIR RHNLTNLELR GESGLSSSEI RFGVRRDLPQ LVELLDRALA
SLSGEERETI RVRWLPPLTE FNWRKALQVG WPYVLGLFVL IVFVLIWNRR LTVQIAERQR
AEAEARRQRS TLLALINAIP DPIWFKDCDG VYRGCNPAFA AIFGRSPETV VGCRDEQLFD
AELSRERAGL DRRALTSRMP LETETWLTHA DGRRVFYDTL RAAFYDDRGQ LLGLVGTGRD
ITVRKEVEDA MARAKALAEQ AAQAKADFLA NMSHEIRTPM NAIIGMSHLA LKTDLDPRQR
DYLNKIQQAG QHLLGVINDI LDFSKIEAGK VRVECIEFDL EQVLDNLANL IGDKAAGKGL
ELLFRRDAQV PCVLLGDPLR LGQILINYAN NAVKFTEHGE VEVSIELEKR DGKQVWLLFS
VRDTGIGLSP AQQARLFESF QQADSSTTRR YGGTGLGLAI CKRLAEAMGG EVGVDSELGR
GSRFWCRLPF ALGDRQRAAL QPQADLRGRR VLVVDDNANA RLVLSEMLRG MTFRVSEAAD
GLQALALLEQ AQAAGDAFEL LFIDWQMPGI DGLELARRVR ALALSPQPKV LMVSAHGRED
LLQGARRMGV EDVLLKPLNP SLLFDVAMRC LDGRADSGHA HGAAGTGIPD FAGRRVLLVE
DNALNQEVAS ALLQEAGLQV DVAGNGQQAI ARLQAAADDH YQLVLMDMQM PVLDGLAATR
LLRAQARFAA LPIVAMTANA LADDRQACLA AGMNDHLSKP IEPTALWSTL MRWLPDVDSG
LRQAQEAVEL DLQLPGVDVA AGLRRVLGKR ELYLELLGKF ASVQADFPAQ LRGALADGDN
ARGERLAHTF KGLAGSIGAS ALQAQAAELE RALASGSDAF EALLAELERQ LQPLLAAIAM
RLPQAPSSAA EGFDQERLRT VCRQLAHLLD DDDPRSGKLL AEQGEMLQSA FNEGYAAIAR
AVQGYDFERA LQVLREAAAQ RGIEC
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