Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_0832 |
Symbol | |
ID | 5108926 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 946713 |
End bp | 948005 |
Gene Length | 1293 bp |
Protein Length | 430 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640502048 |
Product | xanthine/uracil/vitamin C permease |
Protein accession | YP_001186332 |
Protein GI | 146305867 |
COG category | [R] General function prediction only |
COG ID | [COG2252] Permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGGAAA GACTGTTCCA ACTCAAAGCC CACAACACCT CGGTACGCAC CGAGGTACTG GCCGGGATCA CCACCTTCCT GACCATGGCC TACATCCTCT TCGTCAACCC CAACATGCTG GCCGAGACCG GCATGGATCA CGGCGCGGTG TTCGTCGCCA CCTGCCTGGC CGCCGCCATC GGCTCGCTGA TCATGGGTCT TCTGGCCAAC TACCCGATCG CCCTGGCGCC GGGCATGGGC CTCAATGCCT TCTTCACCTA CACCGTGGTC ATGACCATGG GCTACAGCTG GCAGACCGCC CTGGGCGCGG TGTTCCTCTC CGGTGCGATC TTCTTCCTGC TGTCGATCTT CAAGATCCGC GAGTGGATCA TCAACAGCAT CCCCCTGGCC CTGCGTGCCG GCATCGCCGC CGGTATCGGC CTGTTCCTGG CGATCATCGC GCTGAAGAAC GCCGGCATCG TGGTCGACCA CCCGGCCACC CTGGTCGGCC TGGGCGACAT GAGCAAGGGC GGCGCGCTGC TGGCCTGCCT GGGCTTCTTC GTCATCGCCG CACTGGCCTA TCGCAAGGTC ACCGGCGCAG TGATGATCGG CATCCTGCTG GTCACCGGCC TGTCCATCGT GCTCGGCCTG TCCGAGCTGC CGGGCGTGGT CTCGATGCCG CCGTCGCTGA TGCCGACCCT GCTGCAGCTG GATATCGCCG GCGCACTGGA TATCGGCCTG ATCAGCGTGA TCTTCGCCTT CCTCTTCGTC GATCTGTTCG ACACCTCCGG CACCCTGGTC GGCGTCGCGC AGAAGGCCGA CCTGCTGGAC AAGGACGGCA AGATGCCGCG CCTGGGCCGC GCGCTGATGG CCGACAGCAC CGCCACCATG GCCGGCGCCG CGCTGGGCAC CAGCACCACC ACCAGCTACA TCGAATCGGC TGCCGGCATC AGCGCCGGCG GGCGCACCGG TCTGACCGCC TGCGTGGTCG CCGCGCTGTT CCTGCTCAGC CTGTTCTTCG CCCCGCTGGC CGGCTCGGTG CCGGCCTACG CCACCGCTCC GGCGCTGCTG TTCGTCGCCG TGCTGATGAT GAGCAGCCTG GCGCAAATCG ACTGGGACGA CCTGACCGTC GCCGCCCCGG TGGTGGTCGC CGCCCTGGCC ATGCCGCTGA CCTTCTCCAT CGCCAACGGC ATCGCCTTCG GCTTCATCGC CTGGACCGCG GTCAAGGTGC TGTCCGGCCG CTGGCGTGAA CTGAACCCGG CGATGTGGGT GCTCTCTGCC CTGTTCATCG TCAAGCTGGC TTACTTCGCC TGA
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Protein sequence | MLERLFQLKA HNTSVRTEVL AGITTFLTMA YILFVNPNML AETGMDHGAV FVATCLAAAI GSLIMGLLAN YPIALAPGMG LNAFFTYTVV MTMGYSWQTA LGAVFLSGAI FFLLSIFKIR EWIINSIPLA LRAGIAAGIG LFLAIIALKN AGIVVDHPAT LVGLGDMSKG GALLACLGFF VIAALAYRKV TGAVMIGILL VTGLSIVLGL SELPGVVSMP PSLMPTLLQL DIAGALDIGL ISVIFAFLFV DLFDTSGTLV GVAQKADLLD KDGKMPRLGR ALMADSTATM AGAALGTSTT TSYIESAAGI SAGGRTGLTA CVVAALFLLS LFFAPLAGSV PAYATAPALL FVAVLMMSSL AQIDWDDLTV AAPVVVAALA MPLTFSIANG IAFGFIAWTA VKVLSGRWRE LNPAMWVLSA LFIVKLAYFA
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