| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0802 |
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| Symbol | |
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| ID | 5108896 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 911717 |
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| End bp | 914011 |
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| Gene Length | 2295 bp |
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| Protein Length | 764 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640502018 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001186302 |
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| Protein GI | 146305837 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGATA AACATAACAA GCGTGCACCC TTTCCCCAGC GGCATCTGCT GGCCTCGGCC
GTCGGCCTGG CCCTGCTGTC CGGCTTTGCC GTGGCGAAGG AGTCGGCAGT CGAACTGGGC
GATGTAACCG TCCAGGGGCA GCAGGAGAAC GGGCTCAAGG TCGACAAGGC GTCCTCGCCG
AAACAGACCG CCGCATTGCT CGATACGCCG CAAACGGTCA ACGTCATTCC GGAAACCCTG
TTCCGTCAGC AGAACGCCCG CACCCTGACC GATGTGCTGA AGAACACCCC CGGCATCAGC
TTCAACGCCG GCGAAAACGG CTTTGCCAGC GGCACCAACA ACTTCAGCCT GCGCGGTTTC
GATACCAGCG GCAGCATTTT CGTCGATGGC GCGCGCGACA ACGGCAGCTA TACCCGCGAC
GTGTTCAACG TCGAGCAAGT CGAGGTGTTC AAAGGCCCGG CGGCCGACAA CGGCCGCGGT
GGCGCCGGTG GCTACGTCAA CCAGGTGACC AAGACGCCGA CGCTGGAAAG CTTTATCGCC
GGTGGCGCCA GCTTCGGCTT CGATCAGTAC GACTCCGAGC CGCGCCGCCG TGCCACGCTC
GACACCAACC AGATCATCAA CGACAGCACC GCGCTGCGCC TCAACCTGCT GGTCGAGGAC
AGCGGCGTCG CCGGCCGTGA GCATGCCGAG AAGAACAGCT GGGGTTTTGC GCCGTCGCTG
GCCTTCGGCC TGGGTACGGA AACCCGCGCC ATCCTCGCTT ACGAGCATGT CGAAATGAAC
GACCGCCCGG ACTGGGGCGT CTCGGGTGCC TCGGTCAAGG GCATGAAGGG CGACACTCCC
TACAATCCGG CGCTCTCCGG GGTCGACCGC GATGAGTTCT ACGGCCTCAA GTCGGACTTC
GACGACACCA CCAGCGACGC GCTGCTGGTA CGTCTGGAGC ACGATCTGTC CACCGGCATG
ACCCTGAGCA ACCAGACCCG CTGGGCCCGC GTCGACCGTC AGGCGCGCTA CACCGTACCC
TTCCAGTATC TGGGTGGTAC GCAGCTGCGC ACCGATACCC AGTTCTACGA TCGGGTCAAC
ACCAGCCTGA GCAACCTGAC CAACCTTTCG GCGCAGTTCG CCACCGGATC GATCAAGCAC
AACCTTGCGG CCGGTCTCGA ACTCACTCGT GAGGAGGCGG AGGCGGGGAC CTATGCCGAG
GTCAACCCAG GCAACACCAA CATCTTCGAC CCGGACTGGG AGCGCAGCGG GCCGGTCTCC
AAGCGCAGCC GTCTGCGTGA GCGCAGCGAC GTAAACGTCG ATACCGTAGC GCTGTACGTC
TACGACACCC TGGAGTTCAC GCCGCAGTGG CAGCTGACCG GCGGCCTGCG CCTGGAGCAG
TACGACGTGG ACATTCGCAG CCGTAACGTT CAGACCGGCG CGGCCGTCGG TGCCGATGGC
TTCGATGACC GTGAGTTCAG CATCGGCGGC AAGCTCGGTC TGGTCTACAA ACCGGCGCAG
AACGGCAGTG TCTACGCTGC TTATGGCGTC TCCACCCAGC CCCCAGGCTC TTACCTGTCC
AACCCGGACA TTTCGCGGGT AAACGGCCAG GCCTTCCCCG GGTTCGTCGA TGGAGCCGAT
CCGGTGCGTG CGCACAACTA CGAGATCGGT ACCAAGTGGG ACTTCTTCGA CAAGCGCCTG
TCCACCACCG CGGCGCTGTT CTACACGGAG AAGAAGAAGG TCGCCATCAC CGGTCGTGAC
GTCGGCGAGA CCAGCGACAG CCTCAAGGGT TATGGCGAGC AGGTGGTCAA AGGGCTGGAG
CTCGGCGCCA GCGGCAAGAT CACCGACAGC TGGGATGTCT TCGCCGGCAT CGTGTTCATG
GACAGCGAGC GCAAGCACAG TGCCTATCTG GACGAAGTGC GTCGTCGCGC CAATCCGGGG
GACTACGGCA CCGCCCAGCG TACCGATGGC GACGAGCTGG CCTTCACGCC CAAGGTTTCC
GGCAACCTGT GGACCACCTA TCGTCTGCCG GTGGGGCTGA CCCTGGGTCT GGGTGCGCAG
CATGTCGGTT CGTCCTACCT CGGACGTCCG GATGACGCCA GCCGCATCGT CGCCAATGGT
CTGTACGGCA AGCTGCAGAG CTATACCACC TTCGCCGCAA TGGCCAGCTA CGAGGTCAAT
CAGAATGTCG ACGTGCGCCT GAACATCGAC AACCTGACCA ACGAGGAATA CGCCGTGTCC
AGCAACTGGA ACGGGCGTCG CGTGATGCTC GGCGATCCAC GTACCTTCAC CCTGAGCACC
AACTTCCACT TCTAA
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| Protein sequence | MSDKHNKRAP FPQRHLLASA VGLALLSGFA VAKESAVELG DVTVQGQQEN GLKVDKASSP
KQTAALLDTP QTVNVIPETL FRQQNARTLT DVLKNTPGIS FNAGENGFAS GTNNFSLRGF
DTSGSIFVDG ARDNGSYTRD VFNVEQVEVF KGPAADNGRG GAGGYVNQVT KTPTLESFIA
GGASFGFDQY DSEPRRRATL DTNQIINDST ALRLNLLVED SGVAGREHAE KNSWGFAPSL
AFGLGTETRA ILAYEHVEMN DRPDWGVSGA SVKGMKGDTP YNPALSGVDR DEFYGLKSDF
DDTTSDALLV RLEHDLSTGM TLSNQTRWAR VDRQARYTVP FQYLGGTQLR TDTQFYDRVN
TSLSNLTNLS AQFATGSIKH NLAAGLELTR EEAEAGTYAE VNPGNTNIFD PDWERSGPVS
KRSRLRERSD VNVDTVALYV YDTLEFTPQW QLTGGLRLEQ YDVDIRSRNV QTGAAVGADG
FDDREFSIGG KLGLVYKPAQ NGSVYAAYGV STQPPGSYLS NPDISRVNGQ AFPGFVDGAD
PVRAHNYEIG TKWDFFDKRL STTAALFYTE KKKVAITGRD VGETSDSLKG YGEQVVKGLE
LGASGKITDS WDVFAGIVFM DSERKHSAYL DEVRRRANPG DYGTAQRTDG DELAFTPKVS
GNLWTTYRLP VGLTLGLGAQ HVGSSYLGRP DDASRIVANG LYGKLQSYTT FAAMASYEVN
QNVDVRLNID NLTNEEYAVS SNWNGRRVML GDPRTFTLST NFHF
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