Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_0790 |
Symbol | |
ID | 5108884 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 894837 |
End bp | 895544 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640502006 |
Product | silent information regulator protein Sir2 |
Protein accession | YP_001186290 |
Protein GI | 146305825 |
COG category | [K] Transcription |
COG ID | [COG0846] NAD-dependent protein deacetylases, SIR2 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.706815 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTCATC CGAACATCGT CATCCTCACC GGTGCAGGGA TTTCCGCCGA GAGCGGCATC CGCACCTTCC GCGCATCCGA CGGCCTGTGG GAAGACCACC GCATCGAAGA GGTGGCCACG CCTGAAGGCT TCGCCCGCGA CCCGGCGCTG GTGCAGCGCT TCTACGACAT GCGCCGCGCC CAGTTGCGCG ATCCGGCCAT CGCACCGAAT GCCGGGCATC TGGCCCTGGC CGAGCTGGAG GCCGGCTGGC GAGGTGACTT CCTGCTGGTC ACGCAGAACG TCGACAACCT GCACGAGCGC GCCGGCTCCA GGAACCTGCT GCACATGCAT GGCGAGCTGC AGTCGATGCT GTGCAGCAAC AGCCAGCAGC GCTTCCCGCT ACTGGAGGAC ATGCCGGTCG GCCAGGCGTG CGCCTGCTGC GGCCTGGTCG GCACCTTGCG TCCGGATATC GTCTGGTTCG GCGAGATGCC CTATCACATG GAGCGCATCT ATGACGCCCT GGAGCAGTGC GAGCTGTTCG TCAGCATCGG CACCTCGGGG CACGTCTACC CGGCGGCGGG TTTCGTCGAG CAGGCGCGCC GGGCCGGTGC GCATACCCTG GAGATCAATC TGGAACCGAG CCAGGGCCAT TCGCTGTTCG CCGAGAAACG CTATGGGCCG GCTACCGAGC AGCTGCCGCG CTGGGTGGCG GAACTGTTGG CGGGTTGA
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Protein sequence | MSHPNIVILT GAGISAESGI RTFRASDGLW EDHRIEEVAT PEGFARDPAL VQRFYDMRRA QLRDPAIAPN AGHLALAELE AGWRGDFLLV TQNVDNLHER AGSRNLLHMH GELQSMLCSN SQQRFPLLED MPVGQACACC GLVGTLRPDI VWFGEMPYHM ERIYDALEQC ELFVSIGTSG HVYPAAGFVE QARRAGAHTL EINLEPSQGH SLFAEKRYGP ATEQLPRWVA ELLAG
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