Gene Pmen_0786 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0786 
Symbol 
ID5108880 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp886785 
End bp889643 
Gene Length2859 bp 
Protein Length952 aa 
Translation table11 
GC content72% 
IMG OID640502002 
Productphosphoenolpyruvate--protein phosphotransferase 
Protein accessionYP_001186286 
Protein GI146305821 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1080] Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria)
[COG1925] Phosphotransferase system, HPr-related proteins
[COG4668] Mannitol/fructose-specific phosphotransferase system, IIA domain 
TIGRFAM ID[TIGR01003] Phosphotransferase System HPr (HPr) Family
[TIGR01417] phosphoenolpyruvate-protein phosphotransferase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.678842 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGAAC TCGATGCCAG TCAGATCCAG ATGGGCCGGG TTGCGGCGAA CAAGGACGAA 
GCCCTGGCCA TGCTCGGCGA CGCGCTCGCC AGCGCCGGCC TGGCTACTGC GGCTTATCTT
GAGGGCCTGC GGGCGCGCGA GGCGCAGGGG TCGACCTTTC TCGGCCAGGG CATCGCCATT
CCCCATGGCA CGCCGCAGAC CCGCGATCAG GTGCTGCGCA CCGGCGTATG CCTGATCCAG
TTCCCCGACG GCGTGGATTG GGGCAACGGC CAGCTGGTCC ATCTGGCCAT CGCCATTGCC
GCCCAGTCCG ATGAGCACCT GCATCTGCTG CAACTGCTGA CCCGCGCCCT GGGCGAGGGG
GATCTGAGCC AGGCGCTGCG CGAGGCGCGT GAGCCGGCGC AGATCCTCGA GCTGCTGCAG
GGCGCGCCGC AGGCATTGGC GCTGGACGGG CAACTGGTGG CCCTGGGGCA GCCGGCTGAA
GACTTCGACG AATTGCTCTG GCAGGGCGCA CGCCTGTTGC GCCAGGCCGG TTGCGCCAGC
AGCGGCTTCG CCCTCAGGCT GGCGCGTGGC GAACCGCTGC CGCTGGGCGA TGGCCTGTGG
TGGCTGCACA GCGAGGCCAG CGTCGAGCGG CCTGGGCTGG CCTTCGTCAC CCCGGCGCAG
CCGCTGAGCT TTCGCGGTGA GGCGCTGCGC GGCCTGTTCT GCCTGGCCAG CCAGGGCGAG
GCGCATCGGC AGGCGCTGGA GCGATTGTGC GACGTACTGA TCGGCGGGCG CGCCGCTGCG
TTCAGTGAAG CCAGCGACAG CCGCCAGGTG ATCGAGGCGC TGGGCGGCGA GGTGCCGCCG
GACTGGCCGA GCCTGGCGCT GCCGCTGCTC AACGCCCACG GTCTGCATGC CCGCCCGGCC
AAGGTGCTCA GCGAACTGGC GCAGGGCTTT GCCGGCGAGA TCCGCGTGCG CCTGCAGGGC
GATGCGGGCG CCGGGGTCTC GGCCAAGAGC CTCAGCCGCC TGCTGGCGCT GGGTGCGCGA
CGCGGGCAGA TGCTGGAATT CAGCGCCGAG CCCGGCATCG CCGATGTGGC GTTGCCGGCG
CTGCGCGCGG CGCTCGCAGC CGGCCTGGGC GAAACCGTGG AACCGCTGCA TGAAGAGGCA
TCGGCGCCGG CCGTACCGGT GCAGGCGGCG CCGGTCGCAC CGCTGGCCGG CAGCTCGCTG
CAGGCCGTGG CGGCCTCGCC TGGCATCGCC ATGGGGCCGG CGCTGGTGCG TACGCCGCCG
GTCTTCACCT TCGCCGAACG GGGGCAGGGC GGCGATCTCG AGCGCAGCCG CCTGGACGAG
GCGCTGCGCA GCGTCGCCGC GCAGCTCCAG CGCCTGGTGG ACGGTGCCGG TGTGGCGAGC
ATCCGCGAGA TCTTCAGTGC CCACCTGGCC ATGCTCGACG ACCCGGCGTT GCGCGAGGAT
GTCGAGGCGC GTCTGGCCAC TGGCGCCAGT GCCGAGGCGG CCTGGCAGCT GGAAGTGGAG
GCCGCGGCCA GGCGTCAGGA GGCGCTGCAC GACCCGCTGC TCGCCGAGCG CGCTGCCGAT
CTGCGCGACA TCGGCAACCG CGTGCTGGCC CATCTGTGCG GTGTGGAGCT GCCCGGGGAA
CCGAGCGAGC CCTACATCCT GGTGATGAGC GAGGTGGGAC CTTCGGATGT TGCTGCGCTG
GATCGCCAGC GCGTCGCCGG CATTGTCACC GCGCGCGGCG GTGCCACCGC GCACAGCGCG
ATCATCGCCC GCGCCCTGGG CATTCCCGCA CTGGTGGGGG CCGGCGATGG CATGCTGGCG
CTGGCCCAGG GCACGCCGCT GCTGCTCGAT GGCGACAGCG GTCTGCTGCG TGTCGCCCCG
GTTGCGGCCG AGCGCGACCA GGCGCTGCGT GAGCGCGAGC AGGCGCAGCG CCGCCGCGAG
CAGGCGCATG CCGAACGCCT GCAGGCGGCG CAGACCCGTG ACGGCCTGCG CGTGGAGGTG
GCGGCGAATA TCGGCGCCAG TGGCGAAACC GCCGAGGCGG TGGAACTGGG CGCCGATGCG
GTGGGCCTGC TGCGCACCGA GCTGGTGTTC ATGGAGCACG CCCAGGCGCC CGACCAGGCC
GCTCAGGAGC GCGAGTATCG GCGCGTGCTC GACGCCCTGG ACGGCCGGCC GCTGGTGGTG
CGCACCCTCG ACGTCGGTGG CGACAAGCCC TTGCCCTACT GGCCGATGCC GGCCGAGGAG
AACCCCTTCC TCGGCGTGCG CGGCATCCGC CTCAGCCTGC AGCGCCCGGA GATTCTCGAA
ACCCAGCTGC GCGCACTGCT CGCATCGGCC GATGGTCGTC CGCTGCGCAT CATGTTCCCC
ATGGTCGGCG CGGTAGAGGA GTGGCGCGCG GCGCGTGACA TGGTGCAGCG CCTGCGCGCA
GAGATCGAGG TAGCCGATCT GCAGCTCGGC ATCATGATCG AAGTGCCTTC GGCGGCGCTG
CTGGCGCCGG TGCTGGCGCG CGAGGTGGAC TTCTTCAGCA TCGGCACCAA TGACCTGACG
CAGTACTGCC TGGCCATCGA CCGCGGTCAT CCGACCCTCT CGGCGCAGGC CGACGGCCTG
CACCCGGCGG TGCTGCGCCT GATCGAGATG ACCGCCACGG CGGCGCATGC CGAGGGCAAG
TGGGTGGGCG TCTGCGGCGA GCTGGCCAGC GACCGTCTGG CCGTGCCGCT GCTGGTCGGC
CTGGGCGTCG ACGAGCTGAG CGTGACGCCG CGCTCGATTG CCCTGGTCAA GGCGCGTGTG
CGCGAACTGG ATAGCCAGCA GGCTCGTGCC CTGGCGGCAC GAGCCCTGAC CCTGGACAGT
GCCGGCGCGG TACGCGCGCT GGTCGCGGAG ATGCACTGA
 
Protein sequence
MLELDASQIQ MGRVAANKDE ALAMLGDALA SAGLATAAYL EGLRAREAQG STFLGQGIAI 
PHGTPQTRDQ VLRTGVCLIQ FPDGVDWGNG QLVHLAIAIA AQSDEHLHLL QLLTRALGEG
DLSQALREAR EPAQILELLQ GAPQALALDG QLVALGQPAE DFDELLWQGA RLLRQAGCAS
SGFALRLARG EPLPLGDGLW WLHSEASVER PGLAFVTPAQ PLSFRGEALR GLFCLASQGE
AHRQALERLC DVLIGGRAAA FSEASDSRQV IEALGGEVPP DWPSLALPLL NAHGLHARPA
KVLSELAQGF AGEIRVRLQG DAGAGVSAKS LSRLLALGAR RGQMLEFSAE PGIADVALPA
LRAALAAGLG ETVEPLHEEA SAPAVPVQAA PVAPLAGSSL QAVAASPGIA MGPALVRTPP
VFTFAERGQG GDLERSRLDE ALRSVAAQLQ RLVDGAGVAS IREIFSAHLA MLDDPALRED
VEARLATGAS AEAAWQLEVE AAARRQEALH DPLLAERAAD LRDIGNRVLA HLCGVELPGE
PSEPYILVMS EVGPSDVAAL DRQRVAGIVT ARGGATAHSA IIARALGIPA LVGAGDGMLA
LAQGTPLLLD GDSGLLRVAP VAAERDQALR EREQAQRRRE QAHAERLQAA QTRDGLRVEV
AANIGASGET AEAVELGADA VGLLRTELVF MEHAQAPDQA AQEREYRRVL DALDGRPLVV
RTLDVGGDKP LPYWPMPAEE NPFLGVRGIR LSLQRPEILE TQLRALLASA DGRPLRIMFP
MVGAVEEWRA ARDMVQRLRA EIEVADLQLG IMIEVPSAAL LAPVLAREVD FFSIGTNDLT
QYCLAIDRGH PTLSAQADGL HPAVLRLIEM TATAAHAEGK WVGVCGELAS DRLAVPLLVG
LGVDELSVTP RSIALVKARV RELDSQQARA LAARALTLDS AGAVRALVAE MH