Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_0786 |
Symbol | |
ID | 5108880 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 886785 |
End bp | 889643 |
Gene Length | 2859 bp |
Protein Length | 952 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640502002 |
Product | phosphoenolpyruvate--protein phosphotransferase |
Protein accession | YP_001186286 |
Protein GI | 146305821 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1080] Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) [COG1925] Phosphotransferase system, HPr-related proteins [COG4668] Mannitol/fructose-specific phosphotransferase system, IIA domain |
TIGRFAM ID | [TIGR01003] Phosphotransferase System HPr (HPr) Family [TIGR01417] phosphoenolpyruvate-protein phosphotransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.678842 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGAAC TCGATGCCAG TCAGATCCAG ATGGGCCGGG TTGCGGCGAA CAAGGACGAA GCCCTGGCCA TGCTCGGCGA CGCGCTCGCC AGCGCCGGCC TGGCTACTGC GGCTTATCTT GAGGGCCTGC GGGCGCGCGA GGCGCAGGGG TCGACCTTTC TCGGCCAGGG CATCGCCATT CCCCATGGCA CGCCGCAGAC CCGCGATCAG GTGCTGCGCA CCGGCGTATG CCTGATCCAG TTCCCCGACG GCGTGGATTG GGGCAACGGC CAGCTGGTCC ATCTGGCCAT CGCCATTGCC GCCCAGTCCG ATGAGCACCT GCATCTGCTG CAACTGCTGA CCCGCGCCCT GGGCGAGGGG GATCTGAGCC AGGCGCTGCG CGAGGCGCGT GAGCCGGCGC AGATCCTCGA GCTGCTGCAG GGCGCGCCGC AGGCATTGGC GCTGGACGGG CAACTGGTGG CCCTGGGGCA GCCGGCTGAA GACTTCGACG AATTGCTCTG GCAGGGCGCA CGCCTGTTGC GCCAGGCCGG TTGCGCCAGC AGCGGCTTCG CCCTCAGGCT GGCGCGTGGC GAACCGCTGC CGCTGGGCGA TGGCCTGTGG TGGCTGCACA GCGAGGCCAG CGTCGAGCGG CCTGGGCTGG CCTTCGTCAC CCCGGCGCAG CCGCTGAGCT TTCGCGGTGA GGCGCTGCGC GGCCTGTTCT GCCTGGCCAG CCAGGGCGAG GCGCATCGGC AGGCGCTGGA GCGATTGTGC GACGTACTGA TCGGCGGGCG CGCCGCTGCG TTCAGTGAAG CCAGCGACAG CCGCCAGGTG ATCGAGGCGC TGGGCGGCGA GGTGCCGCCG GACTGGCCGA GCCTGGCGCT GCCGCTGCTC AACGCCCACG GTCTGCATGC CCGCCCGGCC AAGGTGCTCA GCGAACTGGC GCAGGGCTTT GCCGGCGAGA TCCGCGTGCG CCTGCAGGGC GATGCGGGCG CCGGGGTCTC GGCCAAGAGC CTCAGCCGCC TGCTGGCGCT GGGTGCGCGA CGCGGGCAGA TGCTGGAATT CAGCGCCGAG CCCGGCATCG CCGATGTGGC GTTGCCGGCG CTGCGCGCGG CGCTCGCAGC CGGCCTGGGC GAAACCGTGG AACCGCTGCA TGAAGAGGCA TCGGCGCCGG CCGTACCGGT GCAGGCGGCG CCGGTCGCAC CGCTGGCCGG CAGCTCGCTG CAGGCCGTGG CGGCCTCGCC TGGCATCGCC ATGGGGCCGG CGCTGGTGCG TACGCCGCCG GTCTTCACCT TCGCCGAACG GGGGCAGGGC GGCGATCTCG AGCGCAGCCG CCTGGACGAG GCGCTGCGCA GCGTCGCCGC GCAGCTCCAG CGCCTGGTGG ACGGTGCCGG TGTGGCGAGC ATCCGCGAGA TCTTCAGTGC CCACCTGGCC ATGCTCGACG ACCCGGCGTT GCGCGAGGAT GTCGAGGCGC GTCTGGCCAC TGGCGCCAGT GCCGAGGCGG CCTGGCAGCT GGAAGTGGAG GCCGCGGCCA GGCGTCAGGA GGCGCTGCAC GACCCGCTGC TCGCCGAGCG CGCTGCCGAT CTGCGCGACA TCGGCAACCG CGTGCTGGCC CATCTGTGCG GTGTGGAGCT GCCCGGGGAA CCGAGCGAGC CCTACATCCT GGTGATGAGC GAGGTGGGAC CTTCGGATGT TGCTGCGCTG GATCGCCAGC GCGTCGCCGG CATTGTCACC GCGCGCGGCG GTGCCACCGC GCACAGCGCG ATCATCGCCC GCGCCCTGGG CATTCCCGCA CTGGTGGGGG CCGGCGATGG CATGCTGGCG CTGGCCCAGG GCACGCCGCT GCTGCTCGAT GGCGACAGCG GTCTGCTGCG TGTCGCCCCG GTTGCGGCCG AGCGCGACCA GGCGCTGCGT GAGCGCGAGC AGGCGCAGCG CCGCCGCGAG CAGGCGCATG CCGAACGCCT GCAGGCGGCG CAGACCCGTG ACGGCCTGCG CGTGGAGGTG GCGGCGAATA TCGGCGCCAG TGGCGAAACC GCCGAGGCGG TGGAACTGGG CGCCGATGCG GTGGGCCTGC TGCGCACCGA GCTGGTGTTC ATGGAGCACG CCCAGGCGCC CGACCAGGCC GCTCAGGAGC GCGAGTATCG GCGCGTGCTC GACGCCCTGG ACGGCCGGCC GCTGGTGGTG CGCACCCTCG ACGTCGGTGG CGACAAGCCC TTGCCCTACT GGCCGATGCC GGCCGAGGAG AACCCCTTCC TCGGCGTGCG CGGCATCCGC CTCAGCCTGC AGCGCCCGGA GATTCTCGAA ACCCAGCTGC GCGCACTGCT CGCATCGGCC GATGGTCGTC CGCTGCGCAT CATGTTCCCC ATGGTCGGCG CGGTAGAGGA GTGGCGCGCG GCGCGTGACA TGGTGCAGCG CCTGCGCGCA GAGATCGAGG TAGCCGATCT GCAGCTCGGC ATCATGATCG AAGTGCCTTC GGCGGCGCTG CTGGCGCCGG TGCTGGCGCG CGAGGTGGAC TTCTTCAGCA TCGGCACCAA TGACCTGACG CAGTACTGCC TGGCCATCGA CCGCGGTCAT CCGACCCTCT CGGCGCAGGC CGACGGCCTG CACCCGGCGG TGCTGCGCCT GATCGAGATG ACCGCCACGG CGGCGCATGC CGAGGGCAAG TGGGTGGGCG TCTGCGGCGA GCTGGCCAGC GACCGTCTGG CCGTGCCGCT GCTGGTCGGC CTGGGCGTCG ACGAGCTGAG CGTGACGCCG CGCTCGATTG CCCTGGTCAA GGCGCGTGTG CGCGAACTGG ATAGCCAGCA GGCTCGTGCC CTGGCGGCAC GAGCCCTGAC CCTGGACAGT GCCGGCGCGG TACGCGCGCT GGTCGCGGAG ATGCACTGA
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Protein sequence | MLELDASQIQ MGRVAANKDE ALAMLGDALA SAGLATAAYL EGLRAREAQG STFLGQGIAI PHGTPQTRDQ VLRTGVCLIQ FPDGVDWGNG QLVHLAIAIA AQSDEHLHLL QLLTRALGEG DLSQALREAR EPAQILELLQ GAPQALALDG QLVALGQPAE DFDELLWQGA RLLRQAGCAS SGFALRLARG EPLPLGDGLW WLHSEASVER PGLAFVTPAQ PLSFRGEALR GLFCLASQGE AHRQALERLC DVLIGGRAAA FSEASDSRQV IEALGGEVPP DWPSLALPLL NAHGLHARPA KVLSELAQGF AGEIRVRLQG DAGAGVSAKS LSRLLALGAR RGQMLEFSAE PGIADVALPA LRAALAAGLG ETVEPLHEEA SAPAVPVQAA PVAPLAGSSL QAVAASPGIA MGPALVRTPP VFTFAERGQG GDLERSRLDE ALRSVAAQLQ RLVDGAGVAS IREIFSAHLA MLDDPALRED VEARLATGAS AEAAWQLEVE AAARRQEALH DPLLAERAAD LRDIGNRVLA HLCGVELPGE PSEPYILVMS EVGPSDVAAL DRQRVAGIVT ARGGATAHSA IIARALGIPA LVGAGDGMLA LAQGTPLLLD GDSGLLRVAP VAAERDQALR EREQAQRRRE QAHAERLQAA QTRDGLRVEV AANIGASGET AEAVELGADA VGLLRTELVF MEHAQAPDQA AQEREYRRVL DALDGRPLVV RTLDVGGDKP LPYWPMPAEE NPFLGVRGIR LSLQRPEILE TQLRALLASA DGRPLRIMFP MVGAVEEWRA ARDMVQRLRA EIEVADLQLG IMIEVPSAAL LAPVLAREVD FFSIGTNDLT QYCLAIDRGH PTLSAQADGL HPAVLRLIEM TATAAHAEGK WVGVCGELAS DRLAVPLLVG LGVDELSVTP RSIALVKARV RELDSQQARA LAARALTLDS AGAVRALVAE MH
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