Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_0716 |
Symbol | dipZ |
ID | 5109046 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 794498 |
End bp | 796285 |
Gene Length | 1788 bp |
Protein Length | 595 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640501929 |
Product | thiol:disulfide interchange protein precursor |
Protein accession | YP_001186216 |
Protein GI | 146305751 |
COG category | [C] Energy production and conversion [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG4232] Thiol:disulfide interchange protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCACTGC GTCGACTGTT GCTTCCCCTG CTTCTGCTCT GCCTGAGTCT GCCCGCCAGC GCCAATCTGT TCGATCAGCG CCCGGCCGCG TCGCCGATTG GTGCGCCGCT GAACAACAGC AGCGATTTCC TGCCGGTGCG TGAAGCCTTC AAGCTGAGCC TGGTCGACAG CGACGCCCAG GCGGTGACCC TGCGCTTCGT CGCTGCCGAG GGCTATTACC TCTATCGCCA CCGCTTCAAT TTCAGCGTCG AGCCGGCCGA TCTGGTCCTC GGCGAGGCCG AGCTGCCCGC CGGCCAGGCC AAGCACGACG AGTTCTTCGG CGATGTCGAG GTCTATTACG GTGTGCTGGA TATCCGCCTG CCGCTGGACA ACCCGGAGCA GCGCCCGCTG CGCCTGCAGG TCGGCTATCA GGGCTGCGCC GACAAGGGCC TGTGCTATCC GCCGGAGACC GAGTTCATCG AGATCGGCGA GATGCCCGCC ACCGCCGACA CCGGCCGCCT GACGCCCCTG GGCGCAACGG CAGCGGCCTG GAACTGGAAG GAGCTGGCCC TGTTCTTCCT CGGCGGCCTG GCGCTGACCT TCACGCCCTG CGTGCTGCCG ATGCTGCCGA TCCTCTCCGG AGTGGTACTG CGCGGCCAGT TCGGCGGCAT GCGCGGGCTG ACCCTGTCGC TGGCCTACGT ACTGCCGATG GCCCTGTGCT TCGCCATTCT CGGCACCCTG ATGGGACTGT TCGGCGCCGG CCTCAATCTG CAGGCGCGCC TGCAGTCGGC CTGGGTACTG GTGCCCTTCG CCGCCTTCTT CACCGTCTTC GCCCTGGCCA TGTTCGGCCT CTTCGAGCTG CGCCTGCCGC GCGCCATCAG CGACCCGCTG GATCGCCTGG CAAGCAAGAC CCATGGCGGC TCGCATCTGA ATGCCGCCCT GCTCGGCGTG CTCTCCAGCC TGCTGGTCAG CCCCTGCGTA TCGGCGCCCC TGGCCGGCGC CCTGCTCTAT ATCAGCGCCA GCGGCGATGC CCTTGGCGGC GGCCTCAGGC TGCTCGCCCT GGGCCTTGGC ATGGGCACGC CGCTGGTGCT GTTCGCCGTC GGTGGCGGCG CGCTGCTGCC CAAGACCGGC ACCTGGATGG TCAGCGTGCG CAATGCCTTC GGCGTGCTGC TGCTGGCCGT CTCGGTGTGG CTGCTGGAGC GCGTGCTGCC AGGCAGCCTC AGCCTGGCAC TATGGGGCCT GCTGGCCGGT GGTGTGGCGG TGTTCCTCGG TGCGCTGGAG TTCGGCCCCA AGACGCACCG GCAGAAGCTT GGCCAGATCG CCGGACTGGC GCTGCTGGTC TATGCCCTGG CCGCCTGGGT CGGCGCGCTG CAGGGCGCGA GCGATCCGCT CCGGCCGCTC GGCCAGTTGC AGGCCGGCAG CGGCGCGGTG AGTGCCAAGA GCGGTGCCTG GCAAACCCTG AGCAGCCCGG CCGAGCTGGA CGCAGCCCTG GCCGAGGCGA AGAACGCAGG CCAGCCCCTG CTGCTGGACT GGTATGCCGA CTGGTGCATC AGTTGCAAGG TCATCGAGCG CGAAGTGTTC GGCAATGCCG AGGTGGGCAG CAAACTGGCC GGCTGGCGCC TGATCCGCTT CGACATCACC GACAGCAACC CCGCCCAGCG CGCCCTGCTC GATCGCTACC GCCTGTTCGG CCCACCCGCC ATTCAGCTGT TTGCCGGCAA TGGTGACGAA TTGCTCGATC TGCGTGTCGT AGGTGAGGTC GATGCCGCCA CCTTCGCCGC GCGTCTGGAT CAGGCCAGCA CGCGCTAG
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Protein sequence | MSLRRLLLPL LLLCLSLPAS ANLFDQRPAA SPIGAPLNNS SDFLPVREAF KLSLVDSDAQ AVTLRFVAAE GYYLYRHRFN FSVEPADLVL GEAELPAGQA KHDEFFGDVE VYYGVLDIRL PLDNPEQRPL RLQVGYQGCA DKGLCYPPET EFIEIGEMPA TADTGRLTPL GATAAAWNWK ELALFFLGGL ALTFTPCVLP MLPILSGVVL RGQFGGMRGL TLSLAYVLPM ALCFAILGTL MGLFGAGLNL QARLQSAWVL VPFAAFFTVF ALAMFGLFEL RLPRAISDPL DRLASKTHGG SHLNAALLGV LSSLLVSPCV SAPLAGALLY ISASGDALGG GLRLLALGLG MGTPLVLFAV GGGALLPKTG TWMVSVRNAF GVLLLAVSVW LLERVLPGSL SLALWGLLAG GVAVFLGALE FGPKTHRQKL GQIAGLALLV YALAAWVGAL QGASDPLRPL GQLQAGSGAV SAKSGAWQTL SSPAELDAAL AEAKNAGQPL LLDWYADWCI SCKVIEREVF GNAEVGSKLA GWRLIRFDIT DSNPAQRALL DRYRLFGPPA IQLFAGNGDE LLDLRVVGEV DAATFAARLD QASTR
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