Gene Pmen_0678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0678 
Symbol 
ID5109008 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp753384 
End bp754553 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content69% 
IMG OID640501891 
Productiron-containing alcohol dehydrogenase 
Protein accessionYP_001186178 
Protein GI146305713 
COG category[C] Energy production and conversion 
COG ID[COG1454] Alcohol dehydrogenase, class IV 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.469552 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCTCG ATCAGTACCG CATGAACTGG AACTACCCCA CCTCGATGCG CGTCGGCGTC 
GGCCGCATCA GCGAGCTGGC CGAGGTCTGC CGCCAGCTCG GCATGCGCGC GCCGCTGCTG
TGTACCGACC CCGGCCTGGC CGCACTGCCG ATGATCGACG CGGCGCTGCG CCAGTGCCGC
GATGCAGGCA TGAACGCAGG GCTGTTCTCG GCGATCAAGG GCAACCCCAC CGGCGCCAAC
GTGATGGACG GTGTGGCGGC GTTCAAGGCC GGCGGGCATG ACGGGGTGAT CGCCTTCGGC
GGCGGCTCGG CGCTGGATGC CGGCAAGGCC ATCGCCCTGA TGGTCGGCCA GGATCGGCCG
CTGTGGGATT TCGAGGACGT CGGCGACAAC GCCAGCCGGG TCAATGTCGC CGGCATGGCG
CCGGTGGTGG CGGTGCCGAC CACCGCCGGC ACCGGCTCGG AAGTCGGCCG CGCCTCGGTG
ATCACCGACG ACGCGGCGCA TATCAAGCGC ATCATCTTCC ACGCGCGCAT GCTGCCGGCG
CTGGTGATTC TCGACCCCGA GCTGACGGTC GGACTGCCGG CCAAGATCAC CGCCGCCACC
GGCATGGACG CGCTGTCGCA CAGCCTGGAG GCCTTCTGCT CGCCGCTGTT CCATCCCATG
GCCGAGGGCA TCGCCATGGA AGGCATGCGT CTGGTGCAGC AGTACCTGCC GCGTGCGGTC
AGTCAGGGCA CCGACGTCGA GGCGCGGCTG CAGATGCTGG TGGCCTCGAG CATGGGCGCC
ACCGCCTTCC AGCGTGGCCT CGGCGCCATG CACGCGCTGG CCCATCCGCT GGGAGCGCTG
TACGACGCCC ATCATGGCCT GCTCAATGCG GTACTGATGC CGTACGTGCT GGTGGCCAAC
CGCGGCGCCA TCGAGCCGCA GATGGAGAAG ATGGCGCGCT ACCTGGCGCT GCCGGGCAGC
GGCTTCGAGG CGGTACTGGA CTGGGTGCTG GCGCTGCGCA GCGAGGTGGG TATCGCACAC
AGCCTGGGCG AGATCGGCAT CGACGATGCG TGCATCGAGC AGGTCGGTCG CATGGCCGAG
GTTGACCCTT CGGCGGGCAC CAACCCCATC GCCTTCAGCG CCGCGCAGTA CAGCGCCTTG
TTCGAGAAAG CACTGCGCGG GGCTTTGTAG
 
Protein sequence
MTLDQYRMNW NYPTSMRVGV GRISELAEVC RQLGMRAPLL CTDPGLAALP MIDAALRQCR 
DAGMNAGLFS AIKGNPTGAN VMDGVAAFKA GGHDGVIAFG GGSALDAGKA IALMVGQDRP
LWDFEDVGDN ASRVNVAGMA PVVAVPTTAG TGSEVGRASV ITDDAAHIKR IIFHARMLPA
LVILDPELTV GLPAKITAAT GMDALSHSLE AFCSPLFHPM AEGIAMEGMR LVQQYLPRAV
SQGTDVEARL QMLVASSMGA TAFQRGLGAM HALAHPLGAL YDAHHGLLNA VLMPYVLVAN
RGAIEPQMEK MARYLALPGS GFEAVLDWVL ALRSEVGIAH SLGEIGIDDA CIEQVGRMAE
VDPSAGTNPI AFSAAQYSAL FEKALRGAL