| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0654 |
|---|
| Symbol | |
|---|
| ID | 5108984 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | + |
|---|
| Start bp | 725731 |
|---|
| End bp | 726837 |
|---|
| Gene Length | 1107 bp |
|---|
| Protein Length | 368 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640501867 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001186154 |
|---|
| Protein GI | 146305689 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.0000736898 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGAGCCG GCTGGCTGTT GCTCGCCACC CTGTTGCTCG GCGCCTGCGA GCAGCAGCGC
GCGCCCCTGT ACCTGCCCAG TGGCGAGGAC TATCCCGACA AGCTCAGCGC CTGGGGTGTA
TTGCAGCAAC GCGGCGGCCA GCTGCAGCCG GCCGCCGGCG TGCTGCCCTA CGACCTCAAC
ACGCCACTGT TCACCGACTA CGCGCACAAG CTGCGCACCG TCTGGATGCC CGCGGGCCGC
AGCGCGCATT ACGCCGAGGC GCGCTTCGAC TATCCCGTCG GCACCGTGCT GAGCAAGACC
TTCTACTACC CGCGCGATGT CCAGGGCCGG CTGCTGCGCA GCGAGCAGCA CGGTGTCGAG
GCGCTGCAGC TCGATCGGGT ACGGCTGCTG GAGACGCGTA TCCTGCTGCG CCAGGAACAG
GGCTGGGTGG CCTTGCCCTA CGTCTGGGAC GAGGCCCAGC GCGACGCCAC CCTGGACTGG
GCCGGCACCA GTTTCGACCT GCAGCTGCAG GATGCGACTG GCGAGGGGCT GGCGGTGGAC
TACCAGGTGC CGGACGCCAA CCAGTGCGCC GGTTGCCATG AACAGCAGGC GGGCAAGGGC
GTGCAGCCGC TGGGGCCGAA GGCGCGGCAC CTGAACAAGG ATTACGTCTA TGCCGATGGC
ACGGTCAATC AGCTGCAGCG CTGGCAGGCC GACGGGCTGC TGCAGGGCGT GCCGGCCGAC
CTGGCCGGGG TACCGCGCAA TGCACTGTGG GGCGCACCAC GTGAAGGGGA GGGCCTGGAA
CATCAGGCGC GCAGCTATCT GGACGCCAAC TGCTCGCACT GTCACAACCC TGAGGGCCCT
GGGCGCACCT CCGGGCTGTA TCTCGACCCG GCCACGCCGC TTGGCATCGC CTATGGGCTC
TGCAAGCAGC CGGTGGCCGC GGGCAAGGGC TCCGGCGACC GCCTGGTGGA TATCCACCCC
GGTGCGCCGG AAAAGTCGGT GCTGAGCTTC CGTCTGCACA GCACCGACCC CAGCATCATG
ATGCCCGAAC TGGGCCGCTC CACCTCCCAC CGCGAAGGCC TGGAGGTGAT CGATCGCTGG
ATCGCCAGTC TCGACGGCGA ATGCTGA
|
|---|
| Protein sequence | MRAGWLLLAT LLLGACEQQR APLYLPSGED YPDKLSAWGV LQQRGGQLQP AAGVLPYDLN
TPLFTDYAHK LRTVWMPAGR SAHYAEARFD YPVGTVLSKT FYYPRDVQGR LLRSEQHGVE
ALQLDRVRLL ETRILLRQEQ GWVALPYVWD EAQRDATLDW AGTSFDLQLQ DATGEGLAVD
YQVPDANQCA GCHEQQAGKG VQPLGPKARH LNKDYVYADG TVNQLQRWQA DGLLQGVPAD
LAGVPRNALW GAPREGEGLE HQARSYLDAN CSHCHNPEGP GRTSGLYLDP ATPLGIAYGL
CKQPVAAGKG SGDRLVDIHP GAPEKSVLSF RLHSTDPSIM MPELGRSTSH REGLEVIDRW
IASLDGEC
|
|---|
| |