| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0644 |
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| Symbol | |
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| ID | 5109606 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 714296 |
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| End bp | 715048 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640501857 |
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| Product | RNA methyltransferase |
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| Protein accession | YP_001186144 |
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| Protein GI | 146305679 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0566] rRNA methylases |
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| TIGRFAM ID | [TIGR00186] rRNA methylase, putative, group 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.000634261 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTCAGT TGGAAAAGGT CTACGGTGTG CATGCCGTGG AGGCGTTGCT GCGCCACCAT
CCCAAGCGGG TCAAGCAGCT GTGGCTGGCC GAGAGCCGTC AGGCGCCGCG TATCCAGCCG
ATGCTGGAGC TGGCGGCGCA GCACCGCGTG CCGGTCGGGC ACAAGGAACG CCAGGAGCTG
GACGAATGGG CCGAGGGCGT GCACCAGGGC GTGGTCGCCG AGGTCAGCCC GAGCCAGGTC
TGGGGTGAGA ACATGCTCGA CGAGCTGCTC GAGCGCAGCG AGGGCGTACC CCTGCTGCTG
GTGCTGGACG GCGTGACCGA TCCGCACAAC CTCGGCGCCT GTCTGCGCAC TGCCGATGCC
GCGGGGGCGC AGGCGGTCAT CGTGCCCAAG GACAAATCCG CCACCCTCAA CGCCACCGTA
CGCAAGGTGG CGTGCGGCGC GGCGGAGGTG ATTCCGCTGG TGGCGGTGAC CAACCTGGCA
CGCACCCTGG AAAAGCTGCA GAAGAAGGGC CTGTGGGTGG TCGGCACCGC TGGTGAGGCC
GAGCAGGAGC TGTACCAGCT CGACATGACC GGCCCGACGG TGCTGGTCAT GGGCGCGGAG
GGCAAGGGCA TGCGTCGCCT GACCCGCGAG CATTGCGATT ACCTGGTCAA GCTGCCCATG
GGCGGCAGCG TCAGCAGCCT CAACGTCTCG GTTGCCACCG GCGTATGCCT GTTCGAGGCG
GTGCGTCAGC GTCAGGCCAA GGGCAAGGGC TGA
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| Protein sequence | MSQLEKVYGV HAVEALLRHH PKRVKQLWLA ESRQAPRIQP MLELAAQHRV PVGHKERQEL
DEWAEGVHQG VVAEVSPSQV WGENMLDELL ERSEGVPLLL VLDGVTDPHN LGACLRTADA
AGAQAVIVPK DKSATLNATV RKVACGAAEV IPLVAVTNLA RTLEKLQKKG LWVVGTAGEA
EQELYQLDMT GPTVLVMGAE GKGMRRLTRE HCDYLVKLPM GGSVSSLNVS VATGVCLFEA
VRQRQAKGKG
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