Gene Pmen_0636 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0636 
Symbol 
ID5109598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp702754 
End bp704055 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content64% 
IMG OID640501847 
ProductGTP-binding protein, HSR1-related 
Protein accessionYP_001186136 
Protein GI146305671 
COG category[R] General function prediction only 
COG ID[COG2262] GTPases 
TIGRFAM ID[TIGR03156] GTP-binding protein HflX 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.0477069 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTCTTCG AGCGTCATGA GGGCGGTGAG CGGGCCATCC TGGTTCATCT GGAAGGCCAA 
GACTCCGAGG CGAGCGAAGA CCCCCAGGAG TTCCAGGAGC TGGCCATGTC GGCGGGCGCC
GACATGGTCG CCTTCTTCAG CGTGCCCAGC AGCCGTCTGA CCGCCAAGTA CCTCATCGGT
AGCGGCAAGG TCGAGGAGCT GCGCGACCAG GTCAGGGCCA TCGAGGCCGA ACTGGTCATC
TTCAATCACA CCCTGACACC GAGCCAGGAG CGCAACCTCG AGCGTGCGTT CGAATGCCGC
GTGCTCGATC GTACCGGGTT GATCCTCGAC ATCTTCGCCC AGCGCGCGCG TACCCATGAA
GGCAAGCTGC AGGTCGAACT GGCGCAGCTC GATCACATGA GCACGCGCCT GGTGCGGGGC
TGGACCCACC TCGAGCGGCA GAAGGGCGGT ATCGGTCTGC GCGGGCCGGG TGAAACCCAG
CTGGAGACCG ACCGTCGCCT GCTGCGCGTG CGCATTCGCC AGATCAAGCA GAAGCTCGAG
AAGGTGCGCA GCCAGCGTGA GCAGGCCAGG CGCGGGCGCA AGCGTGCCGA CATCCCTTCG
GTGTCGCTGG TGGGTTACAC CAACGCCGGC AAGTCCACGC TGTTCAATGC CCTGACCGCT
TCCGAGGTCT ATGCGGCCGA CCAGCTGTTC GCCACGCTCG ACCCGACCCT GCGCCGGCTC
GAGCTGGATG ACCTGGGGCC GATCGTGCTG GCCGATACCG TGGGTTTCAT TCGCCATCTG
CCGCACAAAC TGGTCGAGGC CTTCCGCGCT ACGCTGGAAG AATCGAGCAA TTCCGATCTG
CTGCTGCACG TGATCGACGC CCATGAGCCC GAGCGCATGG CGCAGATCGA GCAGGTGCAG
GCGGTGCTCA AGGAAATCGG CGCGCATGAA TTGCCGATGC TCGAGGTGTA CAACAAGCTG
GATTTGTTGG AAGGTGTCGA GCCGCAGATT CAGCGCGATG CCGATGGCAA GCCGCAGCGA
GTCTGGTTGT CGGCCCGAGA GGGGCGTGGT CTGGAGTTGT TGCGTCAGGC CGTGGCGGAG
CTGTTGGGCG AAGATCTGTT CGTCGGTGTG CTGCAGCTGC CACAGCGTCT GGGACGGCTG
CGTGCGCAGT TCTTCGAGCT GGGGGCGGTG CAGAGCGAGG GGCACGACGA GCAGGGGCAG
AGTTTGCTGT CGGTACGTCT GCCGCGGATC GAGCTCAATC GCCTGGTGAG TCGCGAAGGT
CTGGAGCCTC AGGCCTTCAT CGAGCAACAT ACTTTGCAAT AA
 
Protein sequence
MFFERHEGGE RAILVHLEGQ DSEASEDPQE FQELAMSAGA DMVAFFSVPS SRLTAKYLIG 
SGKVEELRDQ VRAIEAELVI FNHTLTPSQE RNLERAFECR VLDRTGLILD IFAQRARTHE
GKLQVELAQL DHMSTRLVRG WTHLERQKGG IGLRGPGETQ LETDRRLLRV RIRQIKQKLE
KVRSQREQAR RGRKRADIPS VSLVGYTNAG KSTLFNALTA SEVYAADQLF ATLDPTLRRL
ELDDLGPIVL ADTVGFIRHL PHKLVEAFRA TLEESSNSDL LLHVIDAHEP ERMAQIEQVQ
AVLKEIGAHE LPMLEVYNKL DLLEGVEPQI QRDADGKPQR VWLSAREGRG LELLRQAVAE
LLGEDLFVGV LQLPQRLGRL RAQFFELGAV QSEGHDEQGQ SLLSVRLPRI ELNRLVSREG
LEPQAFIEQH TLQ