Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_0636 |
Symbol | |
ID | 5109598 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 702754 |
End bp | 704055 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640501847 |
Product | GTP-binding protein, HSR1-related |
Protein accession | YP_001186136 |
Protein GI | 146305671 |
COG category | [R] General function prediction only |
COG ID | [COG2262] GTPases |
TIGRFAM ID | [TIGR03156] GTP-binding protein HflX |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.0477069 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTTCTTCG AGCGTCATGA GGGCGGTGAG CGGGCCATCC TGGTTCATCT GGAAGGCCAA GACTCCGAGG CGAGCGAAGA CCCCCAGGAG TTCCAGGAGC TGGCCATGTC GGCGGGCGCC GACATGGTCG CCTTCTTCAG CGTGCCCAGC AGCCGTCTGA CCGCCAAGTA CCTCATCGGT AGCGGCAAGG TCGAGGAGCT GCGCGACCAG GTCAGGGCCA TCGAGGCCGA ACTGGTCATC TTCAATCACA CCCTGACACC GAGCCAGGAG CGCAACCTCG AGCGTGCGTT CGAATGCCGC GTGCTCGATC GTACCGGGTT GATCCTCGAC ATCTTCGCCC AGCGCGCGCG TACCCATGAA GGCAAGCTGC AGGTCGAACT GGCGCAGCTC GATCACATGA GCACGCGCCT GGTGCGGGGC TGGACCCACC TCGAGCGGCA GAAGGGCGGT ATCGGTCTGC GCGGGCCGGG TGAAACCCAG CTGGAGACCG ACCGTCGCCT GCTGCGCGTG CGCATTCGCC AGATCAAGCA GAAGCTCGAG AAGGTGCGCA GCCAGCGTGA GCAGGCCAGG CGCGGGCGCA AGCGTGCCGA CATCCCTTCG GTGTCGCTGG TGGGTTACAC CAACGCCGGC AAGTCCACGC TGTTCAATGC CCTGACCGCT TCCGAGGTCT ATGCGGCCGA CCAGCTGTTC GCCACGCTCG ACCCGACCCT GCGCCGGCTC GAGCTGGATG ACCTGGGGCC GATCGTGCTG GCCGATACCG TGGGTTTCAT TCGCCATCTG CCGCACAAAC TGGTCGAGGC CTTCCGCGCT ACGCTGGAAG AATCGAGCAA TTCCGATCTG CTGCTGCACG TGATCGACGC CCATGAGCCC GAGCGCATGG CGCAGATCGA GCAGGTGCAG GCGGTGCTCA AGGAAATCGG CGCGCATGAA TTGCCGATGC TCGAGGTGTA CAACAAGCTG GATTTGTTGG AAGGTGTCGA GCCGCAGATT CAGCGCGATG CCGATGGCAA GCCGCAGCGA GTCTGGTTGT CGGCCCGAGA GGGGCGTGGT CTGGAGTTGT TGCGTCAGGC CGTGGCGGAG CTGTTGGGCG AAGATCTGTT CGTCGGTGTG CTGCAGCTGC CACAGCGTCT GGGACGGCTG CGTGCGCAGT TCTTCGAGCT GGGGGCGGTG CAGAGCGAGG GGCACGACGA GCAGGGGCAG AGTTTGCTGT CGGTACGTCT GCCGCGGATC GAGCTCAATC GCCTGGTGAG TCGCGAAGGT CTGGAGCCTC AGGCCTTCAT CGAGCAACAT ACTTTGCAAT AA
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Protein sequence | MFFERHEGGE RAILVHLEGQ DSEASEDPQE FQELAMSAGA DMVAFFSVPS SRLTAKYLIG SGKVEELRDQ VRAIEAELVI FNHTLTPSQE RNLERAFECR VLDRTGLILD IFAQRARTHE GKLQVELAQL DHMSTRLVRG WTHLERQKGG IGLRGPGETQ LETDRRLLRV RIRQIKQKLE KVRSQREQAR RGRKRADIPS VSLVGYTNAG KSTLFNALTA SEVYAADQLF ATLDPTLRRL ELDDLGPIVL ADTVGFIRHL PHKLVEAFRA TLEESSNSDL LLHVIDAHEP ERMAQIEQVQ AVLKEIGAHE LPMLEVYNKL DLLEGVEPQI QRDADGKPQR VWLSAREGRG LELLRQAVAE LLGEDLFVGV LQLPQRLGRL RAQFFELGAV QSEGHDEQGQ SLLSVRLPRI ELNRLVSREG LEPQAFIEQH TLQ
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