| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0634 |
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| Symbol | miaA |
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| ID | 5109596 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 701405 |
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| End bp | 702379 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640501845 |
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| Product | tRNA delta(2)-isopentenylpyrophosphate transferase |
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| Protein accession | YP_001186134 |
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| Protein GI | 146305669 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase |
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| TIGRFAM ID | [TIGR00174] tRNA isopentenyltransferase (miaA) |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.165805 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGCCG CGCTGCCTCC GGCCATCTTC CTGATGGGGC CGACCGCTGC CGGCAAGACC
GATCTGGCCC TGGCGCTGGC CCGCGTGCTG CCGTGCGACC TGATCAGCGT GGATTCCGCA
CTGGTCTATC GCGGCATGGA TATCGGCACC GCCAAGCCGG ACAAGGCCGT TCTGGCGGAG
TTTCCCCACG CCCTGATCGA CATTCGCGAC CCGGCCGAGA GTTACTCGGC GGCGGAGTTT
CGCGCCGATG CCCTGGCCGC CATGGCCGAA AGCGCCGCGC GCGGGCGCAT TCCGCTGCTG
GTGGGCGGCA CCATGTTGTA TTACAAGGCG TTGCTGGAAG GCCTGGCGGA CATGCCCAGT
GCCGACCCCG TCGTGCGCGC CGAGCTCGAG GCGCGCGCCG CCGTCGAAGG CTGGGAGGCG
CTGCACCGGG AACTGGCCGA GGTCGATCCG CAGTCCGCGG CGCGCATCCA TCCCAATGAC
CCGCAGCGTC TGACCCGCGC GCTGGAGGTC TATCGCGTCA GCGGAATGAG CATGAGCGAG
CACCGCCTGC GTCAGGCCGC GGGAAATCCC GAAGGGGGCA CATCGGCCAG CGGGCAATTA
CCCTATACTG TTGCTCAGCT TGCTATCGCG CCGGCGCAGC GCCAGATTCT GCATGAGCGC
ATCGCACAAC GATTTCAGGC GATGTTGGAA CAGGGTTTCG TCGAAGAGGT CGAAGCCCTG
CGCAGTCGAA GTGACTTGCA CGCGGGATTG CCGTCTATAC GGGCGGTAGG CTATCGCCAG
GTCTGGGAGT ACTTGGACGG CAAGCTGTCA CGGGAGGAAA TGGTCGAGCG CGGCATCATT
GCCACTCGGC AGTTGGCCAA ACGTCAGTTC ACCTGGTTGC GGGGATGGGG CGATCTGCAG
TGGCTGGACA GTCTGGCCTG CGACAATCTG CCTCGCACCT TGAAATACCT GGAAAGCGTC
TCCATATTGA AATGA
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| Protein sequence | MAAALPPAIF LMGPTAAGKT DLALALARVL PCDLISVDSA LVYRGMDIGT AKPDKAVLAE
FPHALIDIRD PAESYSAAEF RADALAAMAE SAARGRIPLL VGGTMLYYKA LLEGLADMPS
ADPVVRAELE ARAAVEGWEA LHRELAEVDP QSAARIHPND PQRLTRALEV YRVSGMSMSE
HRLRQAAGNP EGGTSASGQL PYTVAQLAIA PAQRQILHER IAQRFQAMLE QGFVEEVEAL
RSRSDLHAGL PSIRAVGYRQ VWEYLDGKLS REEMVERGII ATRQLAKRQF TWLRGWGDLQ
WLDSLACDNL PRTLKYLESV SILK
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