Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_0626 |
Symbol | |
ID | 5109588 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 692382 |
End bp | 693413 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640501837 |
Product | ribosome-associated GTPase |
Protein accession | YP_001186126 |
Protein GI | 146305661 |
COG category | [R] General function prediction only |
COG ID | [COG1162] Predicted GTPases |
TIGRFAM ID | [TIGR00157] ribosome small subunit-dependent GTPase A |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 0.749766 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCAAAC GCCAACTCAA TCGCCGCCAG AACTGGCGTA TCGAAAAAAT CCAGGGCGAA CGCGCTGCCC GCGCCGCCAA GCGCGAATCA CGCGCCGTGG AAGCACTGGA AGGCGGCGAC CTCGGCCCGG AACAGACCGG ACTGGTGATC GCGCATTTCG GCGTGCAGGT GGAAATCGAG GGGCTGCAGG GCGAACTGGC CGGGCAGGTG TTCCGCTGCC ACCTGCGCGC CAACCTGCCG GCGCTGGTCA CCGGCGACCA GGTGGTCTGG CGCCCCGGCA ACCAGGGCGA TGGCGTGATC GTCGCACAGC TGCCGAGAAG CAGCGAGCTG TGTCGTCCGG ACATGCGCGG CCAGCTCAAG CCGGTGGCAG CCAACGTCGA TCAGATCGTC ATCGTCTTCG CGCCCCTGCC CGAACCGCAC GCCAACCTGA TCGACCGTTA CCTGGTGGCC GCCGAACATG CCGGCATCCG TCCGCTGCTG CTGCTGAACA AGGCCGACCT GATCGACGAG CAGAATCAGG TGGCGCTGGA GGCCCTGCTC AAGGTCTATC GCCAGCTGGG CTATCCCCTG CTGGAAGTTT CGGCGCATCA GGGCGATGGC ATGGAGCAGC TGAAGAAGCG CCTGGATGGC CACGTCAGCG TCTTCGTCGG CCAGTCCGGG GTCGGTAAAT CGTCATTGGT CAACGGCCTG CTGCCGGGCG TCGACACCCG TGTCGGCGCG CTGTCGGAGC TGACCGGCAA GGGCACCCAT ACCACCACCA CCGCGCGATT GTTCCACTTT CCCGGCGGCG GCCAACTGAT CGATTCCCCC GGCATCCGCG AATTCGGCCT GGGCCACGTC AGCCGCGACG ATGTGGAGGC TGGTTTCATC GAGTTCCACG ACCTGCTCGG GCGCTGCCGT TTCCGCGACT GCAAGCACGA CCGCGAGCCC GGTTGCGCGC TGCTACAGGC CCTGGAGGAC GGGCGCATTC AGGCGCAGCG CATGGCCAGC TACCGCCACA TCCTTGCCAG CCTGCCCGAA GACGATTACT GA
|
Protein sequence | MAKRQLNRRQ NWRIEKIQGE RAARAAKRES RAVEALEGGD LGPEQTGLVI AHFGVQVEIE GLQGELAGQV FRCHLRANLP ALVTGDQVVW RPGNQGDGVI VAQLPRSSEL CRPDMRGQLK PVAANVDQIV IVFAPLPEPH ANLIDRYLVA AEHAGIRPLL LLNKADLIDE QNQVALEALL KVYRQLGYPL LEVSAHQGDG MEQLKKRLDG HVSVFVGQSG VGKSSLVNGL LPGVDTRVGA LSELTGKGTH TTTTARLFHF PGGGQLIDSP GIREFGLGHV SRDDVEAGFI EFHDLLGRCR FRDCKHDREP GCALLQALED GRIQAQRMAS YRHILASLPE DDY
|
| |