Gene Pmen_0624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0624 
Symbol 
ID5109586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp690531 
End bp691382 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content63% 
IMG OID640501835 
Productflagellar motor protein MotA 
Protein accessionYP_001186124 
Protein GI146305659 
COG category[N] Cell motility 
COG ID[COG1291] Flagellar motor component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.895123 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCAAAA TCATAGGCAT CGTCGTCGTG TTTGCGTGCG TGTTCGGCGG TTTCGTTCTG 
TCCGGTGGTC AACTGATGGC ACTGGTCCAT CCCTTCGAGG TTTTGATCAT CGGCGGGGCG
GCCCTGGGGG GCTTCCTCCA GGCCAACCCG GGCAGCATGT TCATGACGGT GTTCAAGAAG
TCGCTGAGCA TGTTCGGCAC CCGCTTCACC CATACCTACT ATCTGGAAGT GCTCAAGCTG
CTCTACGAGA TCCTCAACAA GAGTCGCCGC GAGGGCATGA TGGCCATTGA GGCGGACGTC
GAAGACCCCA ACGCCAGCCC GATCTTCAGC AAGTACCCCG GCGTGCTCAA GGATGCGCGG
ATGACGGCGT TCATCTGCGA TTACCTGCGC ATCATGTCCT CCGGCAACAT GGCCCCCCAC
GAGCTGGAAG GCCTGTTCGA CATGGAGCTG GCCAGCCTCA AGGAGGAGGT GGAGCACCCG
GCCCATGCGG TGGCCAAGAT CGCCGACGGC CTGCCGGCCA TGGGTATCGT CGCGGCCGTG
CTGGGTATCG TGATCACCAT GTCGATCCTC GCCGAGGCGG ACAACGCGCA GATCGGCGAA
AAGGTCGCCA CGGCGCTGGT CGGTACCTTC CTCGGCATCC TTGCTTCCTA TGGCTTCTTC
GGCCCGCTGT CGAATGCGCT GGAGCATGAC GCCAAGGAAG AGCTGAACCT TTACGAGGCG
ATCAAGGCGA CGCTGGTAGC CTCGGCGTCC GGCATGCCGC CGAGCCTGGC CGTGGAGTTC
GGGCGCAAGG TGCTGTTCCC TGCGCACCGG CCGAGCTTCA GCGAGCTCGA GCAGGCCATG
CGTGGCAACT GA
 
Protein sequence
MVKIIGIVVV FACVFGGFVL SGGQLMALVH PFEVLIIGGA ALGGFLQANP GSMFMTVFKK 
SLSMFGTRFT HTYYLEVLKL LYEILNKSRR EGMMAIEADV EDPNASPIFS KYPGVLKDAR
MTAFICDYLR IMSSGNMAPH ELEGLFDMEL ASLKEEVEHP AHAVAKIADG LPAMGIVAAV
LGIVITMSIL AEADNAQIGE KVATALVGTF LGILASYGFF GPLSNALEHD AKEELNLYEA
IKATLVASAS GMPPSLAVEF GRKVLFPAHR PSFSELEQAM RGN