Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_0611 |
Symbol | |
ID | 5109573 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 674098 |
End bp | 675363 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640501822 |
Product | 3-deoxy-D-manno-octulosonic-acid transferase |
Protein accession | YP_001186111 |
Protein GI | 146305646 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1519] 3-deoxy-D-manno-octulosonic-acid transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAGAT ACCTCTATAC CCTGCTGCTG CACCTGGCCC TGCCTCTCAT CGCCCTGCGC CTGGCCTTGC GTGCGCGCAA GGCACCCGCC TATGCGCGGC GCGTTCGGGA GCGCTTCTCC TTCGGCCTGC CGGCGATGAG GCCGGGCGGC ATCTGGGTGC ATGCCGTATC GGTGGGCGAA AGCATCGCCG CCGCGCCAAT GATCCGCGCG CTGCAGGCGC ATTATCCGGA CCTGCCGATC ACCGTCACCT GCATGACGCC GACCGGCTCC GAACGCATCC AGGCGCTGTT CGGCGACAGC GTGCAACACT GCTACCTGCC CTACGATCTG CCCTGGGCCG CGTCGCGTTT TCTCCAGCGC GTGCAACCAC GCCTGGCGGT GGTGATGGAA ACCGAACTGT GGCCCAACCA TATCCACCAG TGCGCCAAAC GCGGCATTCC CATAGCCCTG GCCAATGCGC GGCTGTCGCA GCGTTCAGCA CGCGGTTATG CGCGCTTGCG CAAACTCACT GCGCCGATGC TCGCCGAGCT GTCGCTGATC GCGGTGCAGA CCCAGGCCGA GGCCGAGCGC TTTCTCGATC TGGGCGCACG CCCGAACTGC GTGGAGGTGA CCGGCTCGAT CAAGTTCGAC CTGAAGATCG ATACCGAGCT GCCCCGCCGC GCCAGCGAAC TGCGCCACCA GTGGCAGGCC GAGCGGCGCC CGCTGTGGAT CGCCGCCAGC ACCCACGCCG GCGAAGACGA GATCATCCTG GCCGCCCATC GGCAGCTCCT GCTCGCCTGG CCGGACGCCC TGCTGATTCT GGTGCCGCGT CACCCCGAGC GCTTCAACGC GGTGCATGAG CTGTGCCTGA ATCAGGGCCT GACGACGCGC CGGCGCTCCA GTGGCGAAGC CGTGCAGGCC GGCGACCAGG TGCTGCTGGG CGACACCATG GGCGAGCTGC TGTTTCTCTA TGCGCTGGCC GACGTGGCGT TCGTCGGGGG CAGCCTGGTG GCCAACGGCG GGCACAACCT GCTGGAACCG GCAGCCCTAG GCAAACCGGT GCTAAGCGGC CCGCACCTGT TCAACTTCCT CGAGATCGCC GCACAACTGC GCGAGGCCGG CGCGCTGGGC GAGGTGCAGG ACGCCACCGA CCTGGCCGAC GAGGTCGAGA CGCTATGGCG CGAACCGGAT CGGGCCGAGC GCATGCGCGA GGCCGGCCTG CAGGTGCTGC GGGCCAACCA GGGCGCGCTG GACAGGCTGC TGGAGGGCTT GCACCGCCTC ATGTAG
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Protein sequence | MNRYLYTLLL HLALPLIALR LALRARKAPA YARRVRERFS FGLPAMRPGG IWVHAVSVGE SIAAAPMIRA LQAHYPDLPI TVTCMTPTGS ERIQALFGDS VQHCYLPYDL PWAASRFLQR VQPRLAVVME TELWPNHIHQ CAKRGIPIAL ANARLSQRSA RGYARLRKLT APMLAELSLI AVQTQAEAER FLDLGARPNC VEVTGSIKFD LKIDTELPRR ASELRHQWQA ERRPLWIAAS THAGEDEIIL AAHRQLLLAW PDALLILVPR HPERFNAVHE LCLNQGLTTR RRSSGEAVQA GDQVLLGDTM GELLFLYALA DVAFVGGSLV ANGGHNLLEP AALGKPVLSG PHLFNFLEIA AQLREAGALG EVQDATDLAD EVETLWREPD RAERMREAGL QVLRANQGAL DRLLEGLHRL M
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