Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_0576 |
Symbol | aceE |
ID | 5109539 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 630286 |
End bp | 632931 |
Gene Length | 2646 bp |
Protein Length | 881 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640501789 |
Product | pyruvate dehydrogenase subunit E1 |
Protein accession | YP_001186078 |
Protein GI | 146305613 |
COG category | [C] Energy production and conversion |
COG ID | [COG2609] Pyruvate dehydrogenase complex, dehydrogenase (E1) component |
TIGRFAM ID | [TIGR00759] pyruvate dehydrogenase E1 component, homodimeric type |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.27136 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.00128721 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCAAGACC TCGATCCGAT CGAAACCCAG GAATGGCTGG ACGCCCTTGA ATCCGTCCTC GACCGTGAGG GTGAAGACCG TGCCCATTAC CTGATGACCC GTCTGGGCGA GCTGGCCACC CGTAGCGGTG CGCAACTGCC CTACGCGATC ACCACGCCGT ACCGCAACAC CATCCCGGTC ACCCACGAAG CGCGCATGCC CGGCGACTTG TTCATGGAGC GCCGCATCCG CTCGCTGGTG CGCTGGAACG CCCTGGCCAT GGTGATGCGC ACCAACCTGG ACGACCCGGA TCTGGGTGGC CACATTTCCA GCTTCGCCTC CTCGGCGACC CTGTACGACA TCGGCTTCAA CTACTTCTTC CAGGCCCCGA CCGACGAACA CGGCGGCGAC CTGGTGTTCT ATCAGGGCCA TGCCAGCCCC GGCGTCTACG CCCGCGCCTT CATGGAAGGG CGCATCAGCG AAGATCAAAT GCAGAACTTC CGCCGCGAAG TGGATGGCAA GGGCCTGTCC TCCTATCCGC ACCCCTGGCT GATGCCGGAC TTCTGGCAGT TCCCCACCGT GTCCATGGGC CTCGGCCCGA TCCAGGCGAT CTACCAGGCC CGCTTCATGA AGTACCTGGA AGCGCGCGGC TTCATTCCCG CCGGCAAGCA GAAGGTCTGG TGCTTCATGG GCGACGGCGA GTGCGACGAG CCGGAATCCC TCGGCGCCAT TTCCCTGGCC GGCCGCGAGA AGCTGGACAA CCTGATCTTC GTCATCAACT GCAACCTGCA GCGCCTCGAC GGCCCGGTGC GCGGCAACGG CAAGATCATC CAGGAACTCG AAGGCGTGTT CCGCGGTGCC CAGTGGAACG TCAACAAGGT GGTCTGGGGT CGCTTCTGGG ATCCGCTGTT CGCCAAGGAC AAGGACGGCG CCCTGCAGCG TCGCATGGAC GAAGTGGTCG ACGGTGAATA CCAGAACTAC AAGGCCAAAG ACGGCGCCTA CGTGCGCGAA AACTTCTTCA ACAGCCCGGA ACTCAAGGAG ATGGTCAAGG ACCTCTCCGA CGACGAGATC TGGAAACTCA ACCGTGGCGG CCACGACCCC TACAAGGTCT ACGCGGCTTA CCATCAGGCC GTGAACCACA GCGGCCAGCC GACCGTGATC CTGGCCAAGA CCATCAAGGG CTACGGTACC GGCGCCGGTG AAGCGAAGAA CACCGCGCAC AACACCAAGA AGGTCGATGT CGACAGCCTG CGCCAGTTCC GCGACCGCTT CGACATCCCG GTCAAGGACG AGGACCTGGA AAAGCTGCCG TTCGTCAAAC CGGAGCCGGG CAGCCCCGAG TACAAGTACC TGCACGAGCG CCGCAACGCG CTGGGCGGCT TCGTCCCGCA GCGCCGGCAG AAGAGCTTCA GCATCCCCAC GCCGCCGCTG GATACCCTCA AGGCCATCCT CGACGGCTCG GGCGACCGCG AAATCTCCAC AACCATGGCC TTCGTGCGCA TCCTCGCGCA GCTGGTCAAG GACAAGGAGC TCGGCCAGCG CATCGTTCCG ATCATCCCGG ACGAGGCCCG TACCTTCGGT ATGGAAGGCA TGTTCCGTCA GCTCGGCATC TACTCCTCGG TCGGCCAGCT GTACGAGCCG GTCGATAAAG ACCAGGTGAT GTTCTACAAG GAGGACAAGA AGGGTCAGAT CCTCGAGGAA GGCATCAACG AAGCCGGCGC CATGAGCTCC TTCATCGCCG CCGGTACCTC GTACTCCAAC CACAACCAGC CGATGCTGCC GTTCTACATC TTCTACTCGA TGTTCGGCTT CCAGCGTATC GGCGACCTGG CCTGGGCCGC TGGCGACAGC CGCACCCGTG GCTTCCTGAT CGGCGGCACC GCCGGCCGTA CCACCCTCAA CGGTGAAGGC CTGCAGCACG AAGACGGTCA CAGCCACATG CTGGCAGCGA CCATCCCCAA CTGCCGCACC TACGACCCGA CCTATGGCTA CGAGCTCGCC GTGATCATCC GCGAAGGCAT TCGCCAGATG ACCGAAGAGC AGCAGGACAT CTTCTACTAC ATCACCGTGA TGAACGAGTC GTACCAGCAG CCGGCCATGC CGGAGGGTAT CGAGCAAGGC ATCATCAAGG GCATGTACCT GCTCGAGGAA GACAAGAAGG AAGCCGCACA CCACGTGCAG CTGCTGGGTT CCGGCACCAT TCTGCGCGAA GTGCGCGAAG CGGCGAAGAT CCTGCGCGAC GAGTACAACA TCGGTGCCGA TGTGTGGAGC GTCACCAGCT TCAACGAACT GCGCCGCGAC GGCCTGGCCG TGGAGCGTCG CAACCGCCTG CACCCGGGCC AGAAGCCGCA GCAGACCTAC ATCGAGCAGT GCCTCAGCGG TCGCAAGGGC CCGGTCATCG CCTCCACCGA CTACATGAAG CTGTTCGCCG AGCAGGTTCG TCAGTGGGTA CCGAGCAAGG AATACAAGGT CCTGGGCACC GACGGCTTCG GCCGCAGCGA CAGCCGCAAG CAGCTGCGTC ACTTCTTCGA AGTGGATCGC AACTGGGTCG TGCTGGCCGC CCTGGAAGCC CTGGTAGACC GTGGCGAAAT CGAAGCCAAG GTGCTGGCTG ACGCCATCGC CAAGTTCGGC ATCGACGCCG ACAAAGCCAA CCCCCTGGAC TGCTAA
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Protein sequence | MQDLDPIETQ EWLDALESVL DREGEDRAHY LMTRLGELAT RSGAQLPYAI TTPYRNTIPV THEARMPGDL FMERRIRSLV RWNALAMVMR TNLDDPDLGG HISSFASSAT LYDIGFNYFF QAPTDEHGGD LVFYQGHASP GVYARAFMEG RISEDQMQNF RREVDGKGLS SYPHPWLMPD FWQFPTVSMG LGPIQAIYQA RFMKYLEARG FIPAGKQKVW CFMGDGECDE PESLGAISLA GREKLDNLIF VINCNLQRLD GPVRGNGKII QELEGVFRGA QWNVNKVVWG RFWDPLFAKD KDGALQRRMD EVVDGEYQNY KAKDGAYVRE NFFNSPELKE MVKDLSDDEI WKLNRGGHDP YKVYAAYHQA VNHSGQPTVI LAKTIKGYGT GAGEAKNTAH NTKKVDVDSL RQFRDRFDIP VKDEDLEKLP FVKPEPGSPE YKYLHERRNA LGGFVPQRRQ KSFSIPTPPL DTLKAILDGS GDREISTTMA FVRILAQLVK DKELGQRIVP IIPDEARTFG MEGMFRQLGI YSSVGQLYEP VDKDQVMFYK EDKKGQILEE GINEAGAMSS FIAAGTSYSN HNQPMLPFYI FYSMFGFQRI GDLAWAAGDS RTRGFLIGGT AGRTTLNGEG LQHEDGHSHM LAATIPNCRT YDPTYGYELA VIIREGIRQM TEEQQDIFYY ITVMNESYQQ PAMPEGIEQG IIKGMYLLEE DKKEAAHHVQ LLGSGTILRE VREAAKILRD EYNIGADVWS VTSFNELRRD GLAVERRNRL HPGQKPQQTY IEQCLSGRKG PVIASTDYMK LFAEQVRQWV PSKEYKVLGT DGFGRSDSRK QLRHFFEVDR NWVVLAALEA LVDRGEIEAK VLADAIAKFG IDADKANPLD C
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