| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0564 |
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| Symbol | |
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| ID | 5108188 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 614523 |
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| End bp | 615770 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640501777 |
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| Product | restriction modification system DNA specificity subunit |
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| Protein accession | YP_001186066 |
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| Protein GI | 146305601 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0732] Restriction endonuclease S subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00017151 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 6.20122e-17 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAGTGATT GGGCTGAGAG CTCTCTTGAA CAACTTGTAA CTTTTCAGAA GGGGCGCAAG
GTTGATACCT CGTCGTTTGC CCAAGATGGC TTTGCACCTT ACTTAGGGGC ATCGGGTATT
GAGGGGGGGG ACGACGGATA TGCTGCCACT CAGTTCGCGG TAATGTCCAA GCCAACAGAT
ATCTTGATGC TGTGGGACGG TGAGCGCTCA GGCTTGGTTG GTTATGGCAA AACGGGGGTA
GTCGCTTCGA CCGTTTCAAA ACTCTCCCCG AATGATGCAA TTAACCCCAA GTACCTTTTC
TTTGCATTAT CAGACCGCTT CGCATGGATA CAGCACCGCC GAACGGGGAC GGGCGTTCCC
CATGTGCCTA AAGATCTTGG ACGTATTTTG AGGCTGCGCT ACCCGAGCGA TCCCAGGCTG
CAGATCAAGA TCGCCTCAAT ATTTGAGGCG ACGGACACTC TAATCCAGAA ATCAGAAGCC
TTGATCGCCA AATACCAGCA GATCAAGGCC GGGATGATGC ACGACCTGTT TACCCGTGGC
GTGCTGCCCA ACGGTCAACT GCGACCGCCG CGCAGCGAAG CCCCAGAGCT GTATCAGGAC
ACGTCAATTG GATGGATTCC GAGTATGTGG AAGCTAAAGC GCTGCGCTGA CATATGCACG
AGGATTTGCG TCGGTATTGT TATTCAACCT ACTCAGTACT ATGTGGAGTC AGGTGTTCCA
GCGTTCAGGT CAGCTAACAT TCGCGAGGAT GGGATCGATC CAAGTAATCT AGTTTTCATC
TCGCATGCAT CCAACGAAGT GGTTGCAAAA AGTCAGGTTA AGGCTGGCGA TATTCTTTCA
GTTCGTACTG GATATCCAGG TACAAGTGCT GTCGTTCCAG TTCATTTTGA TAGGGCTAAT
TGCATCGATA TTCTGATATC AACGCCCAGT GCTCAGGTCA TTTCAGAGTA CCTTTGTGAT
TGGATTAACT CTCCTTTTGG AAAAGAACAA GTTCTTCGTC AGCAAGGAGG AATGGCCCAG
CAGCACTTCA ATGTTGGGGA GATGCGTGAA TTATTGGTCG CGCTACCTAG CCGTGAAGAG
CAAGGTGATA TCCGAAATCG TATTGGTGTT GTTGCAAAAA AACTTGCGGC CGAGAAGGCA
CTTTTGGAGA AGCTGCAGTA TCAAAAGCTC GGTTTGATGC ACGATCTGCT GACCGGTAAA
GTCTCCGTCC GAGTCGACAA TCCCGCTTCG GAGTTGGCCA ATGCCTAA
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| Protein sequence | MSDWAESSLE QLVTFQKGRK VDTSSFAQDG FAPYLGASGI EGGDDGYAAT QFAVMSKPTD
ILMLWDGERS GLVGYGKTGV VASTVSKLSP NDAINPKYLF FALSDRFAWI QHRRTGTGVP
HVPKDLGRIL RLRYPSDPRL QIKIASIFEA TDTLIQKSEA LIAKYQQIKA GMMHDLFTRG
VLPNGQLRPP RSEAPELYQD TSIGWIPSMW KLKRCADICT RICVGIVIQP TQYYVESGVP
AFRSANIRED GIDPSNLVFI SHASNEVVAK SQVKAGDILS VRTGYPGTSA VVPVHFDRAN
CIDILISTPS AQVISEYLCD WINSPFGKEQ VLRQQGGMAQ QHFNVGEMRE LLVALPSREE
QGDIRNRIGV VAKKLAAEKA LLEKLQYQKL GLMHDLLTGK VSVRVDNPAS ELANA
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