Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_0553 |
Symbol | |
ID | 5108177 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 596765 |
End bp | 597535 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640501766 |
Product | cobyrinic acid a,c-diamide synthase |
Protein accession | YP_001186055 |
Protein GI | 146305590 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG1192] ATPases involved in chromosome partitioning |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.000721954 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGACGTG TGGTGTTCAA CCAGAAGGGC GGCGTAGGCA AGTCCAGCAT CGCCTGCAAT CTTGCAGCCG TGAGTGCGGC GCAGGGCTAC CGCACCCTGC TGATCGACCT GGATGCGCAG GCCAACTCGA CCCATTACCT CACCGGCCTG ACCGGCGAGG AAATCCCCAT GGGCATCGCC GATTTCTTCA AGCAGACCCT GTCATCCGGA CCGTTCGCCA AGAAGGGCAA GGTGGATATC TACGAGACGC CCTTCGACAA CCTGCACGTG GTCACCGCCA CCGCCGAGCT GGCCGAGTTG CAGCCCAAGC TGGAGCAGAA GCACAAGATC AACAAGCTGC GCAAACTGCT CGACGAGCTG GCCGAGGACT ACGATCACAT CTACCTGGAC ACTCCACCCG CGCTGAATTT CTACACGGTT TCCGCGTTGA TCGCGGCTGA CCGCGTGCTG ATCCCCTTCG ACTGCGACAG TTTCTCGCGC AATGCCCTCT ATGGCCTGCT GGCCGAGATC GAAGAGCTCA AGGACGATCA CAACGAGGAG CTGGAGGTGG AGGGCATCGT GGTCAACCAG TTCCAGCCGC GCGCGACCTT GCCGCAGCAG TTGCTGGATG AGTTGATCAC CGAGGGCTTG CCGGTGTTGC CGGTGAATCT GATGAGCTCG GTGAAGATGC GCGAGTCGCA CCAGGCCTGT ACACCGCTGA TCCATCTGGA TGCACGGCAC AAGCTGACCC AGCAGTTCGT CGAGCTGCAC GATCTGCTCA ACGCCGGTTG A
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Protein sequence | MRRVVFNQKG GVGKSSIACN LAAVSAAQGY RTLLIDLDAQ ANSTHYLTGL TGEEIPMGIA DFFKQTLSSG PFAKKGKVDI YETPFDNLHV VTATAELAEL QPKLEQKHKI NKLRKLLDEL AEDYDHIYLD TPPALNFYTV SALIAADRVL IPFDCDSFSR NALYGLLAEI EELKDDHNEE LEVEGIVVNQ FQPRATLPQQ LLDELITEGL PVLPVNLMSS VKMRESHQAC TPLIHLDARH KLTQQFVELH DLLNAG
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