Gene Pmen_0553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0553 
Symbol 
ID5108177 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp596765 
End bp597535 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content61% 
IMG OID640501766 
Productcobyrinic acid a,c-diamide synthase 
Protein accessionYP_001186055 
Protein GI146305590 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1192] ATPases involved in chromosome partitioning 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.000721954 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGACGTG TGGTGTTCAA CCAGAAGGGC GGCGTAGGCA AGTCCAGCAT CGCCTGCAAT 
CTTGCAGCCG TGAGTGCGGC GCAGGGCTAC CGCACCCTGC TGATCGACCT GGATGCGCAG
GCCAACTCGA CCCATTACCT CACCGGCCTG ACCGGCGAGG AAATCCCCAT GGGCATCGCC
GATTTCTTCA AGCAGACCCT GTCATCCGGA CCGTTCGCCA AGAAGGGCAA GGTGGATATC
TACGAGACGC CCTTCGACAA CCTGCACGTG GTCACCGCCA CCGCCGAGCT GGCCGAGTTG
CAGCCCAAGC TGGAGCAGAA GCACAAGATC AACAAGCTGC GCAAACTGCT CGACGAGCTG
GCCGAGGACT ACGATCACAT CTACCTGGAC ACTCCACCCG CGCTGAATTT CTACACGGTT
TCCGCGTTGA TCGCGGCTGA CCGCGTGCTG ATCCCCTTCG ACTGCGACAG TTTCTCGCGC
AATGCCCTCT ATGGCCTGCT GGCCGAGATC GAAGAGCTCA AGGACGATCA CAACGAGGAG
CTGGAGGTGG AGGGCATCGT GGTCAACCAG TTCCAGCCGC GCGCGACCTT GCCGCAGCAG
TTGCTGGATG AGTTGATCAC CGAGGGCTTG CCGGTGTTGC CGGTGAATCT GATGAGCTCG
GTGAAGATGC GCGAGTCGCA CCAGGCCTGT ACACCGCTGA TCCATCTGGA TGCACGGCAC
AAGCTGACCC AGCAGTTCGT CGAGCTGCAC GATCTGCTCA ACGCCGGTTG A
 
Protein sequence
MRRVVFNQKG GVGKSSIACN LAAVSAAQGY RTLLIDLDAQ ANSTHYLTGL TGEEIPMGIA 
DFFKQTLSSG PFAKKGKVDI YETPFDNLHV VTATAELAEL QPKLEQKHKI NKLRKLLDEL
AEDYDHIYLD TPPALNFYTV SALIAADRVL IPFDCDSFSR NALYGLLAEI EELKDDHNEE
LEVEGIVVNQ FQPRATLPQQ LLDELITEGL PVLPVNLMSS VKMRESHQAC TPLIHLDARH
KLTQQFVELH DLLNAG