| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0539 |
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| Symbol | |
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| ID | 5108163 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 575473 |
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| End bp | 576909 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640501752 |
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| Product | peptidase M48, Ste24p |
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| Protein accession | YP_001186041 |
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| Protein GI | 146305576 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4784] Putative Zn-dependent protease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCGCG CGTTGACGCT CTGTCTGATC TGCAGCTGGC TGGCCGGATG CGCTGTCAAC
CCGGCTACCG GTCGCACCGA TTTCGTGATG ATGAGCGAGC GCCAGGAGCT CGACCTCGGC
GCCCGTTACA ACCAGGAGAT CCTCAAGCAG TACCCACGCT ACGAGGATGC CGGGCTGCAG
GCCTATATCC AGCGCGTCGG CGAGCGGGTG GCGCGCAGCA GCCATCGCAA TCAGCTCAAT
TACGTGTTCA CCCTGGTCGA CAGTCCGGAC ATCAACGCCT TCGCCTTGCC TGGCGGCTAT
ATCTACATCC ACCGCGGGTT GCTCGCCTAT CTCAATTCCG AGGCCGAACT GGCTGCCGTG
CTGGGGCATG AGGTCGGCCA TGTCACGGCC CGCCACAGCG TGCGCCAGCA GAGTCAGTCG
ACCGCCTGGA GCCTGCTCGG CCACGCGGCC GCCATCGGCA CCGGCGTGGG GGCGGTCGGC
GACCTGACCA ATGTCATGGG CAATGCCTTC GTGCGTGGTT ACGGTCGCGA CATGGAACTG
GAGGCCGACG GCCTCGGCGC GCAGTATCTG GCGCGCAGCG GCTATGACCC GCAGGCCATG
ATCGAGGTGG TCAAGGTGCT GAAGAATCAG GAGGACTTCG CACGCGCGCA GGCTGCCAGG
CGTGGCGAGG CGCCGGCAGC GGGCGGTTAT CACGGTCTGT TCGACACCCA TCCCGACAAT
GACCGCCGCC TGCAGGAGGT GATAGGTCCG GCGCGCGCGC TGGCGGTCGG CAATCAGGAG
GTGGGACGCG ACGCCTTCCT GCAGATGCTC GATGGCCTGG TCTTCGGTGA TTCGGCCGCC
AGCGGCATCC GTCGCGGGCG GCATTTCTAT CACGGCGAGC TGGACTTCAC CCTGAGCTAC
CCGCAGGGCT GGCAGCTGGT CAATCGCCCC GACGTGTTGA TCGGCCACAG TGCCGATGAG
CAGGCCTTCA TCGCCATGAC GCTGGAGCCG GCGGACAAGC GCCTGACACC GGCCGAGTTC
CTGCGCAAGC GTGCCGGCAG TCAACGCCTG GTGGCCGGGG AAGAGCTGCG CCTGGGCGCG
CTGCAAGGCT ACACGGCGGT CTTGCAGGGG CAGGCGGCGC GCCGCGTGGC GGTGATCTAT
CGCGACGATA ACGCCTACCT GTTCATCGCC GCGGTGCGAG GGCGGGCGTC GCTGGAAAGC
GAGGATCAGC GCTTTCTCGA GGTGATCCGC AGCTATCGGC CGCTCAAGGC CGACGAGCGC
AAGCTGGCCG AGCCGGTGCG CCTGCATCTG GTGCGGGCCA AGGCCGGGCA GAGCCTGGCT
GCCCTGGCCA AGGAAGTGCC CCAGCAGGGC GATGGTGAAG CGCAGCTGCG CCTGCTCAAT
GGCCTCTATC CCGATGGTGT GCCGCGTGCT GGCGACTGGC TGAAAACCCT GCGCTAG
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| Protein sequence | MMRALTLCLI CSWLAGCAVN PATGRTDFVM MSERQELDLG ARYNQEILKQ YPRYEDAGLQ
AYIQRVGERV ARSSHRNQLN YVFTLVDSPD INAFALPGGY IYIHRGLLAY LNSEAELAAV
LGHEVGHVTA RHSVRQQSQS TAWSLLGHAA AIGTGVGAVG DLTNVMGNAF VRGYGRDMEL
EADGLGAQYL ARSGYDPQAM IEVVKVLKNQ EDFARAQAAR RGEAPAAGGY HGLFDTHPDN
DRRLQEVIGP ARALAVGNQE VGRDAFLQML DGLVFGDSAA SGIRRGRHFY HGELDFTLSY
PQGWQLVNRP DVLIGHSADE QAFIAMTLEP ADKRLTPAEF LRKRAGSQRL VAGEELRLGA
LQGYTAVLQG QAARRVAVIY RDDNAYLFIA AVRGRASLES EDQRFLEVIR SYRPLKADER
KLAEPVRLHL VRAKAGQSLA ALAKEVPQQG DGEAQLRLLN GLYPDGVPRA GDWLKTLR
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