| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0523 |
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| Symbol | ubiE |
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| ID | 5108147 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 558601 |
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| End bp | 559371 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640501736 |
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| Product | ubiquinone/menaquinone biosynthesis methyltransferase |
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| Protein accession | YP_001186025 |
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| Protein GI | 146305560 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
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| TIGRFAM ID | [TIGR01934] ubiquinone/menaquinone biosynthesis methyltransferases |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.846514 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGATC CACGCAAGGC CCAGGAGCAG GAACCCACCA CCCACTTCGG TTTCCAGGAC
GTGCCGGAAA GCCAGAAGGC GGAGAAAGTG GCCGAAGTCT TCCACTCGGT GGCGGCCAAG
TACGACCTGA TGAACGATGT CCTCTCCGGC GGTCTGCATC GCCTGTGGAA GCGCTTCACC
ATCGAGCTGT CCGGCGTGCG CCCGGGCAAC CGCGTGCTGG ATATCGCCGG CGGCACCGGT
GACCTGACCC GCAAGTTCGC CAGCATCGTC GGCCCCACCG GCGAAGTGGT GCTGGCCGAC
ATCAACGACT CCATGCTCAA GGTCGGTCGT GATCGCCTGC TGGACAAGGG CGTGGCCGGC
AACGTGCAGT TCGTCCAGGC CGATGCCGAG AAGCTGCCGT TCCCTGACAA CCACTTCGAC
GTGGTCACCA TCGCCTTCGG CCTGCGCAAC GTCACCCACA AGGAAGACGC CCTGCGCTCC
ATGCTGCGCG TGCTCAAACC CGGCGGCCGC CTGCTGGTGC TGGAATTCTC CAAGCCCGGC
AACCCGCTGC TGGCCAAGGT CTACGACACC TACTCGTTCA GCTTCATGCC GCTGGCCGGC
AAGCTGATCA CCAACGATGC CGACAGCTAT CGCTACCTCG CCGAGTCGAT CCGCATGCAC
CCGGATCAGG AAACCCTCAA GGCGATGATG GTCGACGCCG GCTTCGAGCG CGTCACCTAC
CACAACATGA CCGGCGGCAT CGTCGCCCTG CACCGCGGCA TCAAGCCCTG A
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| Protein sequence | MSDPRKAQEQ EPTTHFGFQD VPESQKAEKV AEVFHSVAAK YDLMNDVLSG GLHRLWKRFT
IELSGVRPGN RVLDIAGGTG DLTRKFASIV GPTGEVVLAD INDSMLKVGR DRLLDKGVAG
NVQFVQADAE KLPFPDNHFD VVTIAFGLRN VTHKEDALRS MLRVLKPGGR LLVLEFSKPG
NPLLAKVYDT YSFSFMPLAG KLITNDADSY RYLAESIRMH PDQETLKAMM VDAGFERVTY
HNMTGGIVAL HRGIKP
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