| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0513 |
|---|
| Symbol | |
|---|
| ID | 5108137 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | + |
|---|
| Start bp | 552021 |
|---|
| End bp | 552992 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640501726 |
|---|
| Product | proline iminopeptidase |
|---|
| Protein accession | YP_001186015 |
|---|
| Protein GI | 146305550 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | [TIGR01249] proline iminopeptidase, Neisseria-type subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 53 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGACTC TGTATCCAGA GATCAAACCC TACGCCCGTC ACGAGCTGGC GGTCGAGCCG
CCGCATGTGC TCTATGTCGA CGAGAGCGGT TCGGCGGACG GGTTGCCGGT GCTGTTCATC
CATGGCGGGC CGGGCGCCGG CTGCGATGCC TCAAGCCGCC GATACTTCGA TCCCAATCTC
TACCGTATCG TCACCTTCGA TCAGCGTGGC TGTGGCCGCT CCACTCCGCA CGCCAGTCTG
GAGAACAACA CCACCCAGGC GCTGATCGGC GATATCGAAC GCATCCGTGA GCACCTGGGG
ATAGACAAGT TCGTGCTGTT CGGCGGCTCC TGGGGCTCGA CCCTGGCGCT GGCCTATGCG
CAAACGCATC CGCAGCGCGT GCACGGGCTG ATTCTGCGCG GCATCTTCCT GTGTCGGCCA
CAGGAATTCA GCTGGTTCTA CCAGGAGGGC GCCAGCCGCC TGTTCCCTGA CTACTGGGAG
GACTACCTCG CGCCGATTCC GCCAGACGAA CGCGGCGATC TGATGCAGGC CTTCTACAAG
CGCCTGACCG GCGCCGATCA GATCGCGCAG ATGCACGCGG CCAAGGCCTG GTCGACCTGG
GAAGGTCGCA CCGCTACCCT GCGGCCCAAC ACCCAGGTGG TCGAACGCTT CAGCGACGCG
CACCGGGCGC TGTCCATCGC CCGTATCGAA TGCCACTACT TCGTCAACGG CGCCTTCCTC
GAGCCCGATC AGTTGCTGCG CGACATGCCG AAGATCGCCC ATCTGCCGGG CATCATCGTG
CACGGTCGCT ATGACGCCAT CTGCCCGCTG GACAACGCCT GGGCACTGCA TCAGGCCTGG
CCCAACAGCG AGCTGCAGAT CATCCGCGAC GCCGGCCATG CGGCCGCCGA GCCCGGCATC
ACCGACGCGC TGGTGCGCGC CGCCGACGAA CTGGCCCGGC GCCTGCTCGA CCTGCCGCCG
GAGGATGCAT GA
|
|---|
| Protein sequence | MQTLYPEIKP YARHELAVEP PHVLYVDESG SADGLPVLFI HGGPGAGCDA SSRRYFDPNL
YRIVTFDQRG CGRSTPHASL ENNTTQALIG DIERIREHLG IDKFVLFGGS WGSTLALAYA
QTHPQRVHGL ILRGIFLCRP QEFSWFYQEG ASRLFPDYWE DYLAPIPPDE RGDLMQAFYK
RLTGADQIAQ MHAAKAWSTW EGRTATLRPN TQVVERFSDA HRALSIARIE CHYFVNGAFL
EPDQLLRDMP KIAHLPGIIV HGRYDAICPL DNAWALHQAW PNSELQIIRD AGHAAAEPGI
TDALVRAADE LARRLLDLPP EDA
|
|---|
| |